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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0976900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.68 (0.0376) R2 : 0.251
β1 : 1.68 (0.138) R2dD : 0.254 R2D : 0.211
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.342 (0.0803) R2dN8 : 0.04 R2N8 : -0.00278
σ : 0.705
deviance : 227.95
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
215.39 0.69 4.67 1.79 0.0509 0.492 -1.63 -1.96 0.455 19.7 92 642 -- --
221.11 0.693 4.66 1.7 0.0892 0.616 -0.903 -- 0.472 19.9 92 648 -- --
220.66 0.692 4.67 1.73 0.0903 0.599 -- -0.898 0.458 20.1 92 649 -- --
222.25 0.694 4.67 1.65 0.107 0.616 -- -- 0.438 19.9 92 643 -- --
221.02 0.692 4.67 1.73 -- 0.524 -- -0.943 0.44 -- 92 654 -- --
225.35 0.704 4.68 1.66 0.0538 -- 0.972 -- 0.343 6.88 -- -- -- --
227.74 0.707 4.68 1.68 0.0617 -- -- -- 0.341 8.64 -- -- -- --
222.76 0.695 4.67 1.65 -- 0.535 -- -- 0.424 -- 92 650 -- --
292.41 0.796 4.69 -- 0.0862 0.735 -- -- 0.311 19.7 90 887 -- --
227.95 0.705 4.68 1.68 -- -- -- -- 0.342 -- -- -- -- --
302.06 0.813 4.72 -- 0.0747 -- -- -- 0.154 6.9 -- -- -- --
288.75 0.791 4.68 -- -- 0.899 -- -- 0.354 -- 86.22 1992 -- --
302.35 0.812 4.73 -- -- -- -- -- 0.156 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 208.01 temperature 30.0 720 < th dose dependent rect. 8 1
4 208.75 temperature 15.0 30 > th dose independent rect. 12 15
8 210.44 humidity 80.0 270 > th dose independent rect. 8 1
12 211.28 humidity 50.0 30 > th dose independent rect. 3 9
13 211.29 precipitation 0.1 30 < th dose independent rect. 3 9
14 211.29 precipitation 0.1 30 < th dose dependent rect. 3 9
15 211.35 temperature 10.0 30 > th dose independent rect. 3 9
17 211.35 atmosphere 995.0 30 > th dose independent rect. 3 9
18 211.35 atmosphere 1015.0 30 < th dose independent rect. 3 9
20 211.55 precipitation 0.1 30 < th dose independent rect. 12 15
21 211.55 precipitation 0.1 30 < th dose dependent rect. 12 15
23 211.78 wind 9.0 30 < th dose independent rect. 12 15
33 211.92 humidity 50.0 30 > th dose independent rect. 12 15
34 211.93 atmosphere 995.0 30 > th dose independent rect. 12 15
35 212.01 temperature 15.0 90 > th dose independent rect. 20 22
36 212.15 temperature 10.0 1440 > th dose independent rect. 4 9
39 212.15 atmosphere 995.0 1440 > th dose independent rect. 4 9
40 212.15 temperature 10.0 1440 > th dose independent rect. 13 15
44 212.26 temperature 20.0 720 > th dose independent rect. 12 1
54 212.68 wind 9.0 30 < th dose independent rect. 3 9
55 212.72 temperature 25.0 270 < th dose independent rect. 7 4
58 212.79 temperature 15.0 30 > th dose independent rect. 12 12
65 213.05 precipitation 0.1 720 < th dose independent rect. 1 23
66 213.05 precipitation 0.1 720 < th dose dependent rect. 1 23
68 213.07 atmosphere 1010.0 10 < th dose independent rect. 12 15
70 213.11 temperature 30.0 90 < th dose dependent rect. 18 1
71 213.14 humidity 80.0 4320 > th dose dependent rect. 3 1
72 213.17 humidity 60.0 90 > th dose independent rect. 23 16
79 213.35 humidity 90.0 4320 > th dose independent rect. 1 3
80 213.37 humidity 90.0 4320 > th dose independent rect. 24 5
81 213.37 humidity 90.0 4320 > th dose dependent rect. 12 1
82 213.44 humidity 90.0 14400 > th dose dependent rect. 10 1
83 213.47 humidity 50.0 10 < th dose independent rect. 11 1
108 213.47 radiation 1.0 720 < th dose independent rect. 9 5
176 213.47 humidity 50.0 10 < th dose dependent rect. 11 1
201 213.47 radiation 1.0 720 < th dose dependent rect. 9 5
270 213.51 humidity 70.0 270 > th dose dependent rect. 8 1
273 213.53 temperature 25.0 270 < th dose independent rect. 23 13
274 213.56 temperature 15.0 270 > th dose independent rect. 20 19
275 213.57 precipitation 0.1 14400 < th dose independent rect. 6 1
277 213.57 precipitation 0.1 14400 < th dose dependent rect. 6 1
278 213.58 temperature 30.0 90 < th dose dependent rect. 9 11
279 213.62 precipitation 0.1 720 < th dose independent rect. 20 17
280 213.62 precipitation 0.1 720 < th dose dependent rect. 20 17
284 213.70 wind 9.0 4320 > th dose independent rect. 15 1
287 213.70 temperature 10.0 270 > th dose dependent rect. 2 13
294 213.76 wind 9.0 4320 > th dose dependent sin 6 NA
307 213.84 humidity 50.0 720 > th dose dependent rect. 24 10
308 213.86 radiation 1.0 720 < th dose independent rect. 10 3
310 213.86 radiation 1.0 720 < th dose dependent rect. 10 3
312 213.88 humidity 80.0 4320 > th dose dependent rect. 23 6
318 213.95 humidity 90.0 14400 > th dose independent rect. 10 3
332 214.06 humidity 90.0 4320 > th dose independent rect. 12 1
333 214.06 wind 7.0 4320 > th dose dependent rect. 15 1
340 214.09 wind 7.0 4320 < th dose independent rect. 6 4
341 214.09 precipitation 0.1 720 < th dose independent rect. 1 7
343 214.09 precipitation 0.1 720 < th dose dependent rect. 1 7
348 214.11 temperature 30.0 270 < th dose dependent rect. 23 13
349 214.12 precipitation 0.1 14400 > th dose independent rect. 6 1
350 214.12 precipitation 0.1 14400 > th dose dependent rect. 6 1
357 214.21 wind 3.0 30 > th dose independent rect. 12 4
358 214.21 temperature 25.0 4320 < th dose dependent rect. 10 1
360 214.23 wind 1.0 30 > th dose independent rect. 18 18
361 214.23 humidity 50.0 30 > th dose independent rect. 18 18
372 214.33 temperature 15.0 270 > th dose independent rect. 10 14
374 214.33 temperature 25.0 720 < th dose dependent rect. 24 20
375 214.35 temperature 20.0 4320 < th dose dependent rect. 21 1
376 214.35 humidity 90.0 720 > th dose dependent rect. 24 20
381 214.36 temperature 20.0 270 > th dose dependent rect. 1 13
388 214.40 temperature 30.0 30 < th dose independent rect. 3 9
394 214.41 atmosphere 1015.0 10 < th dose dependent rect. 3 9
396 214.42 humidity 60.0 30 > th dose independent rect. 12 4
398 214.42 humidity 80.0 30 < th dose dependent rect. 18 2
405 214.44 humidity 60.0 90 > th dose independent rect. 23 14
413 214.45 temperature 30.0 10 < th dose dependent rect. 9 12
421 214.47 wind 7.0 4320 > th dose independent rect. 20 16
422 214.47 temperature 30.0 720 < th dose dependent rect. 24 1
435 214.51 humidity 90.0 14400 < th dose independent rect. 10 3
438 214.52 temperature 25.0 270 > th dose independent rect. 8 5
441 214.53 wind 9.0 720 < th dose independent rect. 20 17
445 214.54 wind 9.0 4320 > th dose dependent rect. 19 19
449 214.57 humidity 90.0 720 > th dose independent rect. 11 2
457 214.59 humidity 50.0 720 > th dose dependent rect. 8 2
459 214.60 wind 1.0 30 > th dose independent rect. 3 9
464 214.60 wind 7.0 4320 > th dose dependent rect. 20 16
466 214.62 wind 7.0 4320 < th dose independent rect. 20 16
473 214.67 precipitation 0.1 30 < th dose independent rect. 18 18
474 214.67 temperature 30.0 10 < th dose dependent rect. 9 4
477 214.67 precipitation 0.1 30 < th dose dependent rect. 18 18
484 214.71 temperature 20.0 4320 < th dose independent rect. 12 4
485 214.71 temperature 10.0 1440 > th dose independent rect. 13 6
490 214.71 temperature 10.0 1440 > th dose independent rect. 19 18
493 214.71 atmosphere 995.0 1440 > th dose independent rect. 19 18
495 214.71 atmosphere 995.0 30 > th dose dependent rect. 12 6
502 214.73 temperature 20.0 4320 < th dose dependent rect. 11 6
509 214.74 atmosphere 995.0 30 > th dose dependent rect. 12 4
519 214.76 temperature 20.0 4320 < th dose dependent rect. 8 14
524 214.78 temperature 25.0 90 < th dose independent rect. 10 1
538 214.80 temperature 10.0 30 > th dose dependent rect. 12 15
543 214.82 wind 9.0 4320 > th dose independent sin 7 NA
549 214.83 temperature 20.0 4320 < th dose dependent rect. 11 11
556 214.85 wind 9.0 4320 > th dose dependent rect. 13 1
562 214.86 atmosphere 1015.0 30 < th dose independent rect. 18 18
567 214.87 wind 7.0 4320 > th dose independent rect. 6 4
573 214.88 precipitation 0.1 4320 > th dose independent rect. 9 4
574 214.88 temperature 15.0 720 > th dose independent rect. 10 6
577 214.88 precipitation 0.1 4320 > th dose dependent rect. 9 4
590 214.91 radiation 20.0 270 > th dose independent rect. 16 1
595 214.91 atmosphere 1010.0 10 < th dose independent rect. 12 6
609 214.92 atmosphere 1000.0 30 > th dose independent rect. 12 6
613 214.93 precipitation 0.1 4320 > th dose independent rect. 9 2
614 214.93 precipitation 0.1 4320 > th dose dependent rect. 9 2
623 214.95 humidity 90.0 720 > th dose dependent rect. 1 2
626 214.96 temperature 20.0 10 > th dose independent rect. 12 4
658 215.03 humidity 90.0 4320 > th dose independent rect. 22 14
669 215.06 temperature 15.0 14400 > th dose independent rect. 8 1
682 215.08 wind 9.0 30 < th dose independent rect. 12 6
705 215.11 wind 1.0 30 > th dose independent rect. 16 20
711 215.12 wind 9.0 4320 < th dose independent rect. 15 1
715 215.12 humidity 90.0 720 > th dose dependent rect. 11 2
721 215.13 precipitation 0.1 4320 < th dose independent rect. 9 4
724 215.13 temperature 30.0 30 < th dose dependent rect. 12 1
725 215.13 precipitation 0.1 4320 < th dose dependent rect. 9 4
729 215.14 temperature 10.0 30 > th dose independent rect. 12 6
734 215.14 temperature 10.0 30 > th dose independent rect. 18 18
735 215.14 atmosphere 995.0 30 > th dose independent rect. 18 18
738 215.15 precipitation 0.1 30 < th dose independent rect. 12 6
744 215.15 precipitation 0.1 30 < th dose dependent rect. 12 6
749 215.16 temperature 30.0 720 < th dose dependent rect. 24 3
753 215.17 humidity 90.0 4320 > th dose independent sin 8 NA
772 215.19 temperature 10.0 10 > th dose dependent rect. 12 4
777 215.20 temperature 15.0 90 > th dose independent rect. 23 16
786 215.21 temperature 15.0 1440 > th dose independent rect. 5 19
789 215.22 wind 3.0 270 > th dose independent rect. 12 1
790 215.22 radiation 10.0 4320 > th dose independent rect. 5 1
809 215.24 precipitation 0.1 1440 < th dose independent rect. 24 3
810 215.24 wind 1.0 30 > th dose independent rect. 12 6
814 215.24 temperature 25.0 720 < th dose dependent sin 3 NA
817 215.24 precipitation 0.1 1440 < th dose dependent rect. 24 3
831 215.26 temperature 15.0 14400 < th dose independent rect. 7 3
833 215.26 humidity 90.0 4320 < th dose independent rect. 23 7
847 215.28 temperature 25.0 270 > th dose independent rect. 1 13
851 215.29 wind 1.0 30 > th dose independent rect. 24 12
852 215.29 humidity 50.0 30 > th dose independent rect. 16 20
877 215.31 wind 9.0 4320 > th dose independent rect. 19 19
878 215.31 humidity 80.0 4320 > th dose dependent sin 9 NA
879 215.31 temperature 25.0 270 > th dose dependent rect. 10 3
880 215.31 temperature 10.0 720 > th dose dependent rect. 2 6
906 215.34 temperature 30.0 720 < th dose independent rect. 20 17
934 215.37 humidity 50.0 720 > th dose dependent rect. 24 1
940 215.37 temperature 10.0 720 > th dose dependent rect. 20 17
941 215.38 wind 9.0 4320 < th dose independent sin 7 NA
943 215.38 humidity 50.0 30 > th dose independent rect. 12 6
944 215.38 precipitation 0.1 720 < th dose independent rect. 20 9
951 215.38 precipitation 0.1 720 < th dose dependent rect. 20 9
960 215.40 humidity 90.0 4320 < th dose independent rect. 1 4
964 215.40 wind 7.0 4320 > th dose dependent rect. 13 3
967 215.41 wind 7.0 30 < th dose independent rect. 12 3
978 215.42 precipitation 0.1 30 < th dose independent rect. 16 20
981 215.42 precipitation 0.1 30 < th dose dependent rect. 16 20
993 215.44 atmosphere 1010.0 10 < th dose independent rect. 12 4