Os01g0976700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Protein phosphatase 2C-like protein.
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Os01g0976700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Protein phosphatase 2C-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.99 | 0.293 | 6.64 | 1.5 | 0.247 | -1.25 | 0.133 | 2.13 | 0.409 | 12.9 | 15.09 | 1246 | -- | -- |
| 42.76 | 0.305 | 6.7 | 1.06 | 0.212 | -1.24 | -0.123 | -- | 0.292 | 11.8 | 13.58 | 1221 | -- | -- |
| 39.03 | 0.291 | 6.64 | 1.48 | 0.232 | -1.27 | -- | 2.05 | 0.403 | 12.8 | 14.8 | 1209 | -- | -- |
| 42.65 | 0.304 | 6.7 | 1.04 | 0.227 | -1.26 | -- | -- | 0.286 | 12.8 | 12.32 | 1211 | -- | -- |
| 41.4 | 0.3 | 6.65 | 1.44 | -- | -1.36 | -- | 2.01 | 0.389 | -- | 15.1 | 1063 | -- | -- |
| 68.14 | 0.387 | 6.75 | 0.657 | 0.373 | -- | 0.0114 | -- | 0.0639 | 13 | -- | -- | -- | -- |
| 68.14 | 0.387 | 6.75 | 0.657 | 0.373 | -- | -- | -- | 0.064 | 13 | -- | -- | -- | -- |
| 44.91 | 0.312 | 6.7 | 1.05 | -- | -1.38 | -- | -- | 0.295 | -- | 14.2 | 1080 | -- | -- |
| 67.23 | 0.382 | 6.74 | -- | 0.254 | -0.815 | -- | -- | 0.106 | 12.9 | 4.314 | 1163 | -- | -- |
| 76.8 | 0.409 | 6.75 | 0.643 | -- | -- | -- | -- | 0.0568 | -- | -- | -- | -- | -- |
| 79.52 | 0.417 | 6.76 | -- | 0.362 | -- | -- | -- | -0.00924 | 12.9 | -- | -- | -- | -- |
| 70.41 | 0.391 | 6.74 | -- | -- | -0.955 | -- | -- | 0.117 | -- | 14.7 | 1023 | -- | -- |
| 87.71 | 0.437 | 6.77 | -- | -- | -- | -- | -- | -0.0145 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 7 | 38.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 8 | 38.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 21 |
| 33 | 39.23 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 37 | 39.26 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 17 |
| 241 | 39.51 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 249 | 39.51 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 250 | 39.52 | temperature | 15 | 1440 | > th | dose dependent | sin | 18 | NA |
| 275 | 39.53 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 280 | 39.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 315 | 39.57 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 337 | 39.58 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 340 | 39.59 | temperature | 10 | 1440 | > th | dose dependent | sin | 0 | NA |
| 379 | 39.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 605 | 39.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 607 | 39.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 13 | 14 |
| 645 | 39.88 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 667 | 39.90 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 784 | 40.00 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 836 | 40.05 | wind | 9 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 863 | 40.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 877 | 40.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 878 | 40.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 879 | 40.10 | temperature | 15 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 903 | 40.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 921 | 40.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |