Os01g0976100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ABC transporter, transmembrane region domain containing protein.
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Os01g0976100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ABC transporter, transmembrane region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 87.01 | 0.438 | 3.22 | 1.29 | 0.169 | -0.529 | 0.0283 | 2.29 | 0.314 | 18.9 | 24.5 | 1495 | -- | -- |
| 89.35 | 0.44 | 3.33 | 0.602 | 0.153 | -0.285 | 0.0663 | -- | 0.0461 | 19.8 | 33.69 | 2126 | -- | -- |
| 87.01 | 0.434 | 3.22 | 1.29 | 0.17 | -0.53 | -- | 2.29 | 0.315 | 18.9 | 24.5 | 1498 | -- | -- |
| 88.3 | 0.438 | 3.31 | 0.654 | 0.162 | -0.336 | -- | -- | 0.121 | 18.6 | 27.19 | 5990 | -- | -- |
| 88.41 | 0.438 | 3.22 | 1.27 | -- | -0.535 | -- | 2.23 | 0.313 | -- | 24.4 | 1439 | -- | -- |
| 93.23 | 0.453 | 3.31 | 0.52 | 0.163 | -- | 0.0582 | -- | 0.0926 | 18.5 | -- | -- | -- | -- |
| 93.24 | 0.452 | 3.31 | 0.519 | 0.163 | -- | -- | -- | 0.0928 | 18.6 | -- | -- | -- | -- |
| 87.89 | 0.437 | 3.3 | 0.607 | -- | -0.298 | -- | -- | 0.121 | -- | 33.58 | 7152 | -- | -- |
| 97.8 | 0.461 | 3.33 | -- | 0.154 | -0.238 | -- | -- | 0.00778 | 18.5 | 29.7 | 6005 | -- | -- |
| 94.62 | 0.455 | 3.31 | 0.515 | -- | -- | -- | -- | 0.0895 | -- | -- | -- | -- | -- |
| 100.34 | 0.469 | 3.33 | -- | 0.157 | -- | -- | -- | 0.035 | 18.7 | -- | -- | -- | -- |
| 97.29 | 0.459 | 3.32 | -- | -- | -0.233 | -- | -- | 0.049 | -- | 33.7 | 7166 | -- | -- |
| 101.62 | 0.471 | 3.32 | -- | -- | -- | -- | -- | 0.0323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 81.65 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 13 | 1 |
| 9 | 81.70 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 21 | 81.79 | wind | 1 | 10 | < th | dose independent | rect. | 13 | 1 |
| 23 | 81.79 | wind | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 31 | 83.12 | radiation | 40 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 71 | 84.55 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 73 | 84.69 | humidity | 80 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 76 | 84.77 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 2 |
| 82 | 84.79 | humidity | 80 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 100 | 84.88 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 116 | 84.92 | wind | 3 | 43200 | < th | dose independent | rect. | 19 | 10 |
| 133 | 85.00 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 135 | 85.01 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 10 |
| 146 | 85.07 | humidity | 80 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 165 | 85.12 | wind | 3 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 167 | 85.12 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 184 | 85.17 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 195 | 85.21 | wind | 3 | 43200 | > th | dose independent | sin | 11 | NA |
| 196 | 85.21 | wind | 3 | 43200 | < th | dose independent | sin | 11 | NA |
| 243 | 85.34 | wind | 3 | 43200 | > th | dose independent | rect. | 18 | 16 |
| 248 | 85.35 | wind | 3 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 263 | 85.38 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 15 |
| 277 | 85.40 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 306 | 85.44 | radiation | 40 | 10 | > th | dose independent | rect. | 14 | 1 |
| 352 | 85.45 | wind | 3 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 377 | 85.48 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 21 |
| 391 | 85.50 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 18 |
| 397 | 85.51 | wind | 9 | 43200 | < th | dose dependent | rect. | 23 | 18 |
| 408 | 85.52 | wind | 1 | 43200 | > th | dose dependent | rect. | 19 | 22 |
| 425 | 85.55 | wind | 3 | 43200 | > th | dose independent | sin | 3 | NA |
| 426 | 85.55 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 443 | 85.57 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 451 | 85.58 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 481 | 85.61 | wind | 3 | 43200 | < th | dose independent | sin | 3 | NA |
| 483 | 85.61 | wind | 3 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 509 | 85.63 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 521 | 85.64 | wind | 3 | 43200 | > th | dose independent | no | NA | NA |
| 528 | 85.64 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 12 |
| 530 | 85.64 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 23 |
| 543 | 85.65 | wind | 1 | 43200 | > th | dose dependent | rect. | 8 | 23 |
| 544 | 85.65 | wind | 1 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 545 | 85.65 | wind | 7 | 43200 | < th | dose dependent | rect. | 14 | 23 |
| 557 | 85.66 | wind | 1 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 558 | 85.66 | wind | 9 | 43200 | < th | dose dependent | rect. | 24 | 21 |
| 574 | 85.67 | wind | 1 | 43200 | > th | dose dependent | no | NA | NA |
| 575 | 85.67 | wind | 9 | 43200 | < th | dose dependent | no | NA | NA |
| 588 | 85.67 | wind | 1 | 43200 | > th | dose dependent | rect. | 11 | 23 |
| 591 | 85.67 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 599 | 85.68 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 600 | 85.68 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 617 | 85.68 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 23 |
| 640 | 85.69 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 653 | 85.70 | wind | 1 | 43200 | > th | dose dependent | sin | 1 | NA |
| 666 | 85.70 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 668 | 85.70 | wind | 9 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 682 | 85.71 | wind | 9 | 43200 | < th | dose dependent | sin | 1 | NA |
| 707 | 85.72 | wind | 3 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 774 | 85.75 | wind | 3 | 43200 | < th | dose independent | no | NA | NA |
| 775 | 85.75 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 862 | 85.78 | wind | 3 | 43200 | < th | dose independent | rect. | 8 | 23 |
| 863 | 85.78 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 885 | 85.79 | wind | 5 | 43200 | < th | dose dependent | sin | 12 | NA |
| 887 | 85.79 | wind | 3 | 43200 | < th | dose dependent | rect. | 24 | 4 |