Os01g0972800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WRKY1 (WRKY transcription factor 17).
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Os01g0972800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WRKY1 (WRKY transcription factor 17).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 285.77 | 0.794 | 3.19 | -0.222 | 0.276 | 0.842 | 0.163 | 3.22 | -0.233 | 9.26 | 22.91 | 355 | -- | -- |
| 295.79 | 0.801 | 3.13 | 0.155 | 0.27 | 0.319 | 0.339 | -- | -0.137 | 9.11 | 25.5 | 410 | -- | -- |
| 285.82 | 0.787 | 3.19 | -0.218 | 0.268 | 0.873 | -- | 3.32 | -0.233 | 9.26 | 22.8 | 368 | -- | -- |
| 294.67 | 0.799 | 3.14 | 0.194 | 0.197 | 0.493 | -- | -- | -0.143 | 8.29 | 37.9 | 805 | -- | -- |
| 289.87 | 0.793 | 3.2 | -0.21 | -- | 0.965 | -- | 3.44 | -0.226 | -- | 22.66 | 390 | -- | -- |
| 296.92 | 0.808 | 3.15 | 0.0448 | 0.299 | -- | 0.65 | -- | -0.222 | 7.82 | -- | -- | -- | -- |
| 297.87 | 0.808 | 3.15 | 0.0646 | 0.301 | -- | -- | -- | -0.221 | 8.68 | -- | -- | -- | -- |
| 296.28 | 0.802 | 3.14 | 0.23 | -- | 0.655 | -- | -- | -0.119 | -- | 39.01 | 719 | -- | -- |
| 295.54 | 0.801 | 3.14 | -- | 0.215 | 0.412 | -- | -- | -0.176 | 8.37 | 66.16 | 794 | -- | -- |
| 303 | 0.813 | 3.16 | 0.0654 | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
| 297.98 | 0.807 | 3.15 | -- | 0.302 | -- | -- | -- | -0.228 | 8.66 | -- | -- | -- | -- |
| 297.54 | 0.803 | 3.15 | -- | -- | 0.569 | -- | -- | -0.156 | -- | 68.48 | 693 | -- | -- |
| 303.11 | 0.813 | 3.16 | -- | -- | -- | -- | -- | -0.226 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 276.38 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 2 | 276.51 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 6 | 277.61 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 8 | 277.72 | wind | 9.0 | 90 | > th | dose independent | rect. | 19 | 15 |
| 11 | 277.93 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 17 | 278.78 | wind | 7.0 | 90 | > th | dose dependent | rect. | 24 | 10 |
| 22 | 279.00 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 6 |
| 26 | 279.21 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 27 | 279.21 | wind | 9.0 | 90 | > th | dose independent | rect. | 1 | 9 |
| 36 | 279.83 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 47 | 280.47 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 49 | 280.47 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 52 | 280.47 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 54 | 280.47 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 82 | 281.57 | humidity | 80.0 | 90 | < th | dose independent | rect. | 24 | 6 |
| 83 | 281.68 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 95 | 281.83 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 97 | 281.91 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 103 | 282.16 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 107 | 282.16 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 208 | 284.44 | humidity | 80.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 233 | 284.94 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 243 | 285.20 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 244 | 285.25 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 17 |
| 245 | 285.29 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 14 | 12 |
| 249 | 285.35 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 15 |
| 284 | 285.71 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 309 | 285.93 | temperature | 30.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 310 | 285.93 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 327 | 285.93 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 335 | 285.95 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 388 | 286.02 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 22 | 3 |
| 484 | 286.36 | radiation | 10.0 | 90 | < th | dose independent | rect. | 11 | 1 |
| 518 | 286.59 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 533 | 286.66 | wind | 5.0 | 10 | > th | dose dependent | rect. | 20 | 14 |
| 559 | 286.79 | humidity | 70.0 | 90 | < th | dose independent | rect. | 8 | 1 |
| 566 | 286.84 | temperature | 25.0 | 90 | > th | dose independent | rect. | 9 | 5 |
| 587 | 286.96 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 24 | 14 |
| 596 | 287.00 | wind | 5.0 | 10 | > th | dose dependent | rect. | 22 | 5 |
| 604 | 287.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 623 | 287.06 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 638 | 287.09 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 666 | 287.14 | wind | 5.0 | 720 | < th | dose independent | rect. | 18 | 5 |
| 672 | 287.15 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 12 |
| 677 | 287.16 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 684 | 287.18 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 698 | 287.26 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 699 | 287.26 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 13 |
| 705 | 287.29 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 19 |
| 710 | 287.31 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 711 | 287.31 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 5 |
| 719 | 287.36 | temperature | 20.0 | 270 | < th | dose independent | rect. | 8 | 23 |
| 736 | 287.37 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 738 | 287.37 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 749 | 287.41 | temperature | 20.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 758 | 287.44 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 763 | 287.47 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 765 | 287.48 | temperature | 20.0 | 720 | > th | dose independent | rect. | 18 | 4 |
| 773 | 287.50 | temperature | 20.0 | 270 | < th | dose independent | sin | 8 | NA |
| 775 | 287.51 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 780 | 287.52 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 23 |
| 781 | 287.52 | wind | 5.0 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 782 | 287.52 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 16 | 22 |
| 783 | 287.52 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 796 | 287.55 | temperature | 25.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 797 | 287.55 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 19 | 11 |
| 818 | 287.61 | wind | 7.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 840 | 287.62 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 20 |
| 846 | 287.64 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 15 | 19 |
| 859 | 287.68 | temperature | 20.0 | 720 | > th | dose independent | sin | 17 | NA |
| 861 | 287.68 | temperature | 20.0 | 270 | < th | dose independent | rect. | 18 | 13 |
| 866 | 287.68 | wind | 5.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 874 | 287.70 | temperature | 20.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 884 | 287.72 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 2 | 2 |
| 888 | 287.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 23 |
| 891 | 287.72 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 913 | 287.75 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 914 | 287.75 | wind | 5.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 915 | 287.75 | wind | 1.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 922 | 287.76 | wind | 1.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 968 | 287.81 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 15 |
| 970 | 287.82 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 2 | 2 |
| 983 | 287.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 23 |