Os01g0971200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF707 family protein.
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Os01g0971200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF707 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.88 | 0.199 | 11.8 | 0.0273 | 0.21 | 0.443 | -0.0435 | 1.06 | 0.0263 | 1.17 | 5.3 | 671 | -- | -- |
| 18.56 | 0.201 | 11.7 | 0.0136 | 0.229 | 0.288 | 0.0805 | -- | 0.032 | 0.643 | 5.399 | 684 | -- | -- |
| 17.88 | 0.197 | 11.8 | 0.0322 | 0.208 | 0.447 | -- | 1.09 | 0.0288 | 1.03 | 5.4 | 683 | -- | -- |
| 18.54 | 0.201 | 11.7 | -0.00386 | 0.222 | 0.29 | -- | -- | 0.0398 | 0.893 | 5.3 | 675 | -- | -- |
| 20.24 | 0.21 | 11.8 | 0.0655 | -- | 0.613 | -- | 1.29 | 0.0333 | -- | 5.5 | 741 | -- | -- |
| 19.48 | 0.207 | 11.7 | -0.0662 | 0.265 | -- | 0.0375 | -- | 0.033 | 0.0497 | -- | -- | -- | -- |
| 19.49 | 0.207 | 11.7 | -0.0677 | 0.264 | -- | -- | -- | 0.0328 | 0.0568 | -- | -- | -- | -- |
| 20.75 | 0.212 | 11.7 | 0.0363 | -- | 0.392 | -- | -- | 0.0358 | -- | 4.499 | 777 | -- | -- |
| 18.49 | 0.2 | 11.7 | -- | 0.221 | 0.284 | -- | -- | 0.038 | 1.07 | 5.099 | 676 | -- | -- |
| 23.89 | 0.228 | 11.7 | -0.0594 | -- | -- | -- | -- | 0.0366 | -- | -- | -- | -- | -- |
| 19.61 | 0.207 | 11.7 | -- | 0.264 | -- | -- | -- | 0.0403 | 0.0424 | -- | -- | -- | -- |
| 20.79 | 0.212 | 11.7 | -- | -- | 0.377 | -- | -- | 0.0316 | -- | 4.472 | 771 | -- | -- |
| 23.99 | 0.229 | 11.7 | -- | -- | -- | -- | -- | 0.0432 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.21 | radiation | 10 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 13 | 17.22 | radiation | 30 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 15 | 17.23 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 28 | 17.24 | radiation | 10 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 32 | 17.31 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 49 | 17.35 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 50 | 17.35 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 53 | 17.36 | radiation | 30 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 65 | 17.36 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 9 |
| 76 | 17.37 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 84 | 17.38 | radiation | 10 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 106 | 17.38 | radiation | 40 | 43200 | < th | dose dependent | rect. | 19 | 11 |
| 110 | 17.39 | temperature | 20 | 30 | > th | dose independent | rect. | 7 | 17 |
| 111 | 17.39 | radiation | 40 | 43200 | < th | dose independent | rect. | 15 | 19 |
| 134 | 17.40 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 21 |
| 135 | 17.41 | radiation | 40 | 43200 | < th | dose independent | sin | 11 | NA |
| 142 | 17.41 | temperature | 20 | 30 | > th | dose independent | rect. | 5 | 23 |
| 193 | 17.43 | humidity | 80 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 248 | 17.47 | radiation | 10 | 43200 | < th | dose independent | sin | 11 | NA |
| 250 | 17.47 | wind | 3 | 14400 | > th | dose dependent | sin | 4 | NA |
| 258 | 17.48 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 266 | 17.49 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 296 | 17.49 | humidity | 80 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 334 | 17.51 | humidity | 70 | 43200 | < th | dose independent | rect. | 21 | 14 |
| 342 | 17.51 | humidity | 80 | 43200 | < th | dose dependent | sin | 9 | NA |
| 356 | 17.52 | humidity | 70 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 424 | 17.53 | radiation | 40 | 43200 | > th | dose dependent | sin | 11 | NA |
| 434 | 17.54 | humidity | 70 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 461 | 17.54 | wind | 7 | 14400 | > th | dose dependent | rect. | 19 | 18 |
| 463 | 17.55 | radiation | 20 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 466 | 17.55 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 471 | 17.55 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 520 | 17.56 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 536 | 17.56 | wind | 3 | 14400 | > th | dose dependent | rect. | 1 | 14 |
| 539 | 17.56 | wind | 3 | 14400 | > th | dose dependent | rect. | 24 | 16 |
| 546 | 17.57 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 9 |
| 552 | 17.57 | wind | 7 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 556 | 17.57 | humidity | 80 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 557 | 17.57 | radiation | 30 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 610 | 17.58 | wind | 7 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 622 | 17.58 | wind | 3 | 14400 | > th | dose dependent | rect. | 3 | 11 |
| 678 | 17.60 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 711 | 17.60 | wind | 7 | 14400 | > th | dose dependent | rect. | 15 | 22 |
| 715 | 17.61 | humidity | 60 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 742 | 17.61 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 764 | 17.62 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 795 | 17.62 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 796 | 17.62 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 820 | 17.63 | wind | 7 | 14400 | > th | dose independent | sin | 4 | NA |
| 860 | 17.63 | wind | 3 | 14400 | > th | dose dependent | rect. | 4 | 8 |
| 905 | 17.64 | wind | 7 | 14400 | < th | dose independent | sin | 3 | NA |
| 913 | 17.64 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 5 |