Os01g0970600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : DEAD/DEAH box helicase domain containing protein.
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Os01g0970600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : DEAD/DEAH box helicase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.91 | 0.393 | 8.32 | 0.55 | 0.695 | 0.374 | 0.118 | -2.54 | 0.0738 | 11.8 | 24.1 | 1203 | -- | -- |
| 71.9 | 0.395 | 8.35 | 0.317 | 0.685 | 1.17 | 0.0481 | -- | 0.011 | 11.8 | 19.01 | 2579 | -- | -- |
| 69.97 | 0.39 | 8.32 | 0.543 | 0.697 | 0.381 | -- | -2.49 | 0.0726 | 11.8 | 24 | 1211 | -- | -- |
| 71.76 | 0.395 | 8.37 | 0.323 | 0.695 | 1.16 | -- | -- | 0.00226 | 11.7 | 19.06 | 2580 | -- | -- |
| 96.72 | 0.458 | 8.3 | 0.788 | -- | 0.88 | -- | -3.09 | 0.165 | -- | 33.33 | 945 | -- | -- |
| 82.99 | 0.427 | 8.4 | -0.0461 | 0.724 | -- | -0.163 | -- | -0.133 | 11.9 | -- | -- | -- | -- |
| 83.11 | 0.427 | 8.4 | -0.0528 | 0.725 | -- | -- | -- | -0.134 | 11.9 | -- | -- | -- | -- |
| 99.35 | 0.464 | 8.4 | 0.289 | -- | 1.45 | -- | -- | -0.00213 | -- | 20.43 | 940 | -- | -- |
| 73.7 | 0.4 | 8.39 | -- | 0.681 | 0.974 | -- | -- | -0.0642 | 11.8 | 18.74 | 2569 | -- | -- |
| 116.18 | 0.504 | 8.42 | -0.0748 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 83.18 | 0.427 | 8.4 | -- | 0.725 | -- | -- | -- | -0.128 | 11.9 | -- | -- | -- | -- |
| 100.71 | 0.467 | 8.39 | -- | -- | 1.27 | -- | -- | -0.0473 | -- | 20.4 | 935 | -- | -- |
| 116.32 | 0.503 | 8.41 | -- | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 2 | 68.23 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 3 | 68.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 4 | 68.26 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 7 | 68.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 10 | 68.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 13 | 68.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 34 | 68.57 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 54 | 68.73 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 130 | 69.27 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 177 | 69.47 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 284 | 69.87 | temperature | 10 | 1440 | > th | dose dependent | sin | 15 | NA |
| 301 | 69.90 | temperature | 20 | 1440 | > th | dose independent | sin | 15 | NA |
| 302 | 69.90 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 312 | 69.94 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 321 | 69.95 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 323 | 69.96 | temperature | 20 | 1440 | < th | dose independent | sin | 15 | NA |
| 324 | 69.96 | radiation | 30 | 4320 | < th | dose independent | rect. | 4 | 4 |
| 328 | 69.97 | radiation | 30 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 335 | 69.97 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 16 |
| 343 | 69.99 | radiation | 30 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 361 | 70.01 | radiation | 30 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 426 | 70.15 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 17 |
| 466 | 70.19 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 467 | 70.19 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 20 |
| 476 | 70.21 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 492 | 70.21 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 20 |
| 499 | 70.22 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 506 | 70.23 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 510 | 70.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 18 |
| 522 | 70.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 595 | 70.29 | temperature | 20 | 1440 | > th | dose independent | rect. | 12 | 15 |
| 687 | 70.35 | temperature | 20 | 1440 | < th | dose independent | rect. | 12 | 15 |
| 693 | 70.35 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 16 |
| 701 | 70.36 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 731 | 70.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 747 | 70.39 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 749 | 70.39 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 7 |
| 829 | 70.45 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 848 | 70.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 910 | 70.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 915 | 70.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 947 | 70.53 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 2 |
| 961 | 70.54 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 4 |