Os01g0968800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dehydration responsive element binding protein 1F (DREB1F protein).
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Os01g0968800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dehydration responsive element binding protein 1F (DREB1F protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.8 | 0.293 | 2.75 | 0.0835 | 0.017 | 0.476 | 0.121 | -4.42 | 0.000506 | 9.91 | 50.17 | 361 | -- | -- |
| 41.27 | 0.301 | 2.77 | 0.0013 | 0.00137 | -0.494 | 0.25 | -- | 0.00907 | 15 | 50.17 | 361 | -- | -- |
| 38.86 | 0.29 | 2.75 | 0.0852 | 0.0183 | 0.476 | -- | -4.4 | 0.000634 | 10 | 50.19 | 364 | -- | -- |
| 36.89 | 0.283 | 2.77 | -0.0515 | 0.00718 | -1.25 | -- | -- | 0.0206 | 2.42 | 42 | 285 | -- | -- |
| 38.87 | 0.29 | 2.75 | 0.0921 | -- | 0.497 | -- | -4.46 | 0.000795 | -- | 50.01 | 364 | -- | -- |
| 43.46 | 0.309 | 2.78 | 0.0143 | 0.0397 | -- | 0.312 | -- | -0.00457 | 15 | -- | -- | -- | -- |
| 43.79 | 0.31 | 2.78 | 0.0211 | 0.0409 | -- | -- | -- | -0.00279 | 14.4 | -- | -- | -- | -- |
| 36.74 | 0.282 | 2.77 | -0.0573 | -- | -1.45 | -- | -- | 0.015 | -- | 42 | 285 | -- | -- |
| 36.86 | 0.283 | 2.77 | -- | 0.00323 | -1.41 | -- | -- | 0.0114 | 13.7 | 42.08 | 285 | -- | -- |
| 43.88 | 0.31 | 2.78 | 0.0194 | -- | -- | -- | -- | -0.00379 | -- | -- | -- | -- | -- |
| 43.8 | 0.31 | 2.78 | -- | 0.0405 | -- | -- | -- | -0.00514 | 14.3 | -- | -- | -- | -- |
| 36.87 | 0.283 | 2.77 | -- | -- | -1.41 | -- | -- | 0.0119 | -- | 42.28 | 285 | -- | -- |
| 43.89 | 0.309 | 2.78 | -- | -- | -- | -- | -- | -0.00594 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.13 | wind | 5 | 10 | > th | dose independent | rect. | 21 | 2 |
| 5 | 35.52 | wind | 5 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 23 | 35.76 | wind | 1 | 30 | < th | dose independent | rect. | 17 | 1 |
| 35 | 35.76 | wind | 1 | 30 | < th | dose dependent | rect. | 17 | 1 |
| 132 | 36.14 | wind | 9 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 299 | 36.46 | wind | 9 | 90 | > th | dose independent | rect. | 18 | 4 |
| 329 | 36.56 | humidity | 70 | 90 | < th | dose independent | rect. | 17 | 1 |
| 360 | 36.68 | humidity | 50 | 270 | < th | dose dependent | rect. | 15 | 21 |
| 395 | 36.77 | humidity | 70 | 90 | < th | dose dependent | rect. | 17 | 1 |
| 397 | 36.78 | humidity | 50 | 270 | < th | dose independent | rect. | 14 | 22 |
| 474 | 36.99 | humidity | 50 | 270 | > th | dose independent | sin | 11 | NA |
| 569 | 37.61 | humidity | 50 | 270 | < th | dose independent | sin | 11 | NA |
| 591 | 37.72 | humidity | 60 | 720 | > th | dose independent | rect. | 3 | 8 |
| 619 | 37.98 | humidity | 60 | 720 | < th | dose independent | rect. | 9 | 2 |
| 667 | 38.22 | humidity | 60 | 720 | < th | dose dependent | rect. | 10 | 1 |
| 673 | 38.32 | humidity | 60 | 720 | < th | dose dependent | rect. | 9 | 3 |
| 713 | 38.44 | humidity | 50 | 30 | > th | dose independent | sin | 7 | NA |
| 741 | 38.54 | humidity | 50 | 270 | < th | dose dependent | sin | 11 | NA |
| 796 | 38.76 | atmosphere | 1010 | 90 | > th | dose dependent | rect. | 11 | 1 |
| 797 | 38.76 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 882 | 38.82 | wind | 9 | 30 | < th | dose independent | sin | 10 | NA |
| 944 | 38.94 | humidity | 50 | 270 | < th | dose dependent | rect. | 11 | 4 |
| 975 | 39.03 | humidity | 60 | 720 | > th | dose independent | rect. | 19 | 16 |