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Os01g0967000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Small nuclear ribonucleoprotein-like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0133) R2 : 0.688
β1 : 0.958 (0.0486) R2dD : 0.277 R2D : 0.22
β2 : 0.865 (0.0347) R2dC : 0.429 R2C : 0.398
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.217 (0.0283) R2dN8 : 0.0539 R2N8 : -0.00749
σ : 0.25
deviance : 28.39
__
_____
C
peak time of C : 18
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.92 0.239 13 0.674 0.873 0.247 0.0455 -0.517 0.108 18 19.89 4120 -- --
26.25 0.239 13 0.752 0.887 0.336 0.0871 -- 0.13 17.9 19.49 4110 -- --
25.75 0.236 13 0.691 0.875 0.24 -- -0.514 0.118 18 19.9 2747 -- --
26.15 0.238 13 0.778 0.869 0.354 -- -- 0.136 18 19.52 2738 -- --
65 0.375 13 0.676 -- 0.24 -- -0.458 0.0947 -- 20.07 3519 -- --
28.37 0.25 12.9 0.959 0.865 -- 0.102 -- 0.217 18 -- -- -- --
28.39 0.25 12.9 0.958 0.865 -- -- -- 0.217 18 -- -- -- --
65.09 0.376 12.9 0.675 -- 0.373 -- -- 0.121 -- 19.1 6429 -- --
29.69 0.254 13 -- 0.863 0.831 -- -- -0.0266 18.1 17.3 47520 -- --
67.19 0.383 12.9 0.933 -- -- -- -- 0.197 -- -- -- -- --
52.6 0.339 13 -- 0.851 -- -- -- 0.11 18.1 -- -- -- --
68.37 0.385 13 -- -- 0.788 -- -- -0.0578 -- 16.64 47520 -- --
90.16 0.443 13 -- -- -- -- -- 0.0938 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.00 atmosphere 1005.0 10 > th dose dependent rect. 3 6
2 24.04 atmosphere 1005.0 90 > th dose dependent rect. 2 7
3 24.04 temperature 10.0 10 > th dose dependent rect. 9 18
21 24.27 atmosphere 1005.0 270 > th dose dependent rect. 4 1
27 24.31 temperature 10.0 270 > th dose dependent rect. 6 8
37 24.41 temperature 20.0 10 > th dose dependent rect. 9 6
47 24.50 atmosphere 1005.0 10 < th dose dependent rect. 24 10
49 24.51 atmosphere 1005.0 90 > th dose independent rect. 3 6
52 24.52 temperature 10.0 43200 > th dose independent rect. 10 6
62 24.59 wind 1.0 14400 < th dose independent rect. 24 2
63 24.59 atmosphere 1005.0 10 > th dose independent rect. 4 5
80 24.63 temperature 10.0 43200 > th dose independent rect. 10 8
86 24.65 temperature 20.0 270 > th dose dependent rect. 9 1
103 24.74 wind 1.0 14400 > th dose independent rect. 24 2
125 24.79 humidity 90.0 10 < th dose independent rect. 4 5
136 24.81 temperature 20.0 10 > th dose dependent rect. 9 8
141 24.82 temperature 30.0 30 < th dose dependent rect. 4 16
143 24.83 temperature 20.0 10 > th dose dependent rect. 9 14
145 24.84 atmosphere 1005.0 270 < th dose dependent rect. 23 8
149 24.85 atmosphere 1005.0 270 > th dose independent rect. 4 1
163 24.91 atmosphere 1005.0 270 > th dose independent rect. 3 3
167 24.91 atmosphere 1005.0 270 < th dose dependent rect. 1 6
262 25.10 atmosphere 1000.0 30 > th dose independent rect. 20 8
268 25.11 atmosphere 1000.0 270 > th dose independent rect. 19 7
285 25.13 atmosphere 1005.0 90 < th dose dependent rect. 3 7
296 25.15 wind 3.0 4320 > th dose independent rect. 8 1
297 25.15 wind 3.0 4320 < th dose independent rect. 8 1
300 25.16 atmosphere 1005.0 270 < th dose dependent rect. 3 4
349 25.24 atmosphere 1005.0 270 < th dose dependent rect. 5 1
352 25.24 atmosphere 1005.0 10 < th dose dependent rect. 4 6
359 25.25 temperature 25.0 270 > th dose dependent rect. 19 18
363 25.25 wind 1.0 43200 < th dose dependent rect. 7 20
371 25.27 wind 5.0 4320 < th dose dependent rect. 8 1
378 25.27 temperature 25.0 270 > th dose dependent rect. 18 20
379 25.28 temperature 25.0 90 > th dose independent rect. 9 5
387 25.29 wind 1.0 43200 > th dose independent rect. 14 13
388 25.29 wind 3.0 43200 < th dose dependent rect. 8 1
406 25.31 wind 1.0 43200 < th dose independent rect. 14 13
413 25.32 wind 5.0 90 < th dose independent rect. 3 6
414 25.32 temperature 30.0 10 < th dose independent rect. 4 16
436 25.34 wind 1.0 43200 > th dose independent rect. 16 11
437 25.34 wind 9.0 10 < th dose independent rect. 9 19
446 25.35 wind 1.0 43200 > th dose independent sin 15 NA
455 25.36 wind 9.0 14400 < th dose independent rect. 23 4
458 25.36 temperature 25.0 90 > th dose dependent sin 3 NA
467 25.37 wind 9.0 90 < th dose independent rect. 9 18
475 25.38 precipitation 0.1 90 < th dose independent rect. 9 18
486 25.38 wind 1.0 43200 < th dose dependent rect. 10 17
488 25.38 precipitation 0.1 90 < th dose dependent rect. 9 18
500 25.40 radiation 1.0 1440 < th dose independent rect. 11 1
502 25.40 radiation 1.0 1440 < th dose dependent rect. 11 1
527 25.42 wind 1.0 14400 < th dose dependent rect. 23 3
534 25.43 temperature 25.0 270 > th dose independent rect. 9 2
540 25.43 temperature 10.0 10 > th dose dependent rect. 4 5
580 25.46 wind 1.0 43200 < th dose independent sin 16 NA
583 25.46 temperature 25.0 270 > th dose dependent sin 7 NA
587 25.46 wind 9.0 270 < th dose dependent rect. 7 7
611 25.48 precipitation 0.1 10 < th dose independent rect. 4 5
612 25.48 atmosphere 995.0 43200 > th dose independent rect. 20 16
617 25.48 precipitation 0.1 10 < th dose dependent rect. 4 5
629 25.49 wind 5.0 270 < th dose independent rect. 4 1
635 25.49 atmosphere 1000.0 270 > th dose independent rect. 20 15
637 25.49 atmosphere 995.0 43200 < th dose independent rect. 21 15
658 25.50 temperature 30.0 90 < th dose independent rect. 3 6
659 25.50 atmosphere 1010.0 30 < th dose independent rect. 9 6
660 25.50 precipitation 0.1 90 < th dose independent rect. 3 6
663 25.50 wind 9.0 10 < th dose dependent rect. 4 5
664 25.50 precipitation 0.1 90 < th dose dependent rect. 3 6
669 25.51 temperature 10.0 10 > th dose independent rect. 4 5
671 25.51 temperature 30.0 10 < th dose independent rect. 4 5
672 25.51 humidity 50.0 10 > th dose independent rect. 4 5
674 25.51 atmosphere 995.0 10 > th dose independent rect. 4 5
675 25.51 atmosphere 1015.0 10 < th dose independent rect. 4 5
677 25.51 atmosphere 995.0 43200 > th dose independent rect. 23 12
679 25.51 atmosphere 995.0 43200 < th dose independent rect. 22 13
689 25.51 temperature 10.0 10 > th dose independent rect. 9 19
739 25.53 atmosphere 995.0 43200 < th dose dependent sin 10 NA
740 25.53 wind 7.0 43200 > th dose dependent rect. 1 1
744 25.53 wind 9.0 90 < th dose dependent rect. 3 6
757 25.54 atmosphere 995.0 43200 > th dose independent rect. 3 6
758 25.54 wind 7.0 270 < th dose independent rect. 6 9
774 25.54 atmosphere 995.0 43200 < th dose dependent rect. 22 11
782 25.55 atmosphere 995.0 43200 > th dose independent rect. 5 3
785 25.55 atmosphere 995.0 43200 > th dose independent rect. 1 9
808 25.56 atmosphere 995.0 43200 < th dose independent sin 7 NA
810 25.56 wind 7.0 43200 > th dose independent rect. 1 1
815 25.56 atmosphere 995.0 43200 < th dose independent rect. 2 7
816 25.56 radiation 1.0 30 > th dose independent rect. 9 9
818 25.56 atmosphere 995.0 43200 < th dose independent rect. 24 10
835 25.56 temperature 25.0 90 > th dose dependent rect. 19 22
836 25.57 wind 3.0 14400 < th dose independent rect. 6 4
837 25.57 atmosphere 995.0 43200 < th dose independent rect. 4 4
838 25.57 wind 3.0 14400 > th dose independent rect. 6 5
852 25.57 atmosphere 995.0 10 > th dose independent rect. 9 19
853 25.57 wind 1.0 43200 < th dose dependent sin 17 NA
869 25.58 wind 7.0 43200 < th dose independent rect. 1 1
879 25.58 wind 9.0 270 < th dose independent rect. 5 23
880 25.58 humidity 50.0 43200 < th dose dependent rect. 8 1
892 25.59 atmosphere 995.0 43200 > th dose independent sin 7 NA
900 25.59 humidity 70.0 43200 < th dose independent rect. 18 14
918 25.60 radiation 20.0 4320 < th dose independent rect. 17 4
922 25.60 temperature 20.0 4320 < th dose independent rect. 16 10
933 25.60 atmosphere 995.0 43200 < th dose dependent rect. 3 5
947 25.61 temperature 20.0 4320 > th dose independent rect. 16 9
952 25.61 humidity 70.0 43200 > th dose independent rect. 18 14
960 25.61 wind 1.0 43200 > th dose independent rect. 7 21
976 25.62 temperature 25.0 10 > th dose independent rect. 9 6
977 25.62 wind 3.0 14400 > th dose independent rect. 6 9