Os01g0966900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sorbitol transporter.
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Os01g0966900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sorbitol transporter.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.97 | 0.517 | 10.6 | -1.02 | 1.26 | 1.2 | 0.887 | 0.808 | -0.635 | 4.72 | 24.75 | 3441 | -- | -- |
| 121.59 | 0.514 | 10.6 | -0.818 | 1.28 | 1.22 | 0.942 | -- | -0.569 | 4.66 | 24.7 | 3461 | -- | -- |
| 122.99 | 0.517 | 10.6 | -1.03 | 1.27 | 1.2 | -- | 0.818 | -0.637 | 4.67 | 24.8 | 3461 | -- | -- |
| 123.55 | 0.518 | 10.6 | -0.792 | 1.27 | 1.25 | -- | -- | -0.571 | 4.62 | 24.75 | 3461 | -- | -- |
| 190.03 | 0.646 | 10.6 | -1.19 | -- | 0.766 | -- | 0.702 | -0.544 | -- | 24.8 | 3461 | -- | -- |
| 159.86 | 0.593 | 10.7 | -1.26 | 1.29 | -- | 1.02 | -- | -0.899 | 5.04 | -- | -- | -- | -- |
| 162.48 | 0.597 | 10.7 | -1.26 | 1.3 | -- | -- | -- | -0.904 | 4.96 | -- | -- | -- | -- |
| 192.62 | 0.649 | 10.6 | -0.999 | -- | 0.791 | -- | -- | -0.476 | -- | 24.7 | 3428 | -- | -- |
| 138.18 | 0.547 | 10.6 | -- | 1.25 | 1.53 | -- | -- | -0.443 | 4.56 | 24.8 | 3470 | -- | -- |
| 250.95 | 0.74 | 10.7 | -1.21 | -- | -- | -- | -- | -0.871 | -- | -- | -- | -- | -- |
| 204.37 | 0.669 | 10.7 | -- | 1.27 | -- | -- | -- | -0.764 | 5 | -- | -- | -- | -- |
| 218.43 | 0.691 | 10.6 | -- | -- | 0.866 | -- | -- | -0.33 | -- | 24.7 | 3428 | -- | -- |
| 289.78 | 0.795 | 10.7 | -- | -- | -- | -- | -- | -0.736 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.41 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 3 | 117.03 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 4 | 117.06 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 9 | 117.44 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 26 | 117.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 33 | 118.33 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 34 | 118.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 35 | 118.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 65 | 119.54 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 75 | 119.89 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 88 | 120.30 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 103 | 120.75 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 139 | 121.37 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 141 | 121.41 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 147 | 121.49 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 161 | 121.62 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 163 | 121.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 4 |
| 166 | 121.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 188 | 121.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 263 | 122.18 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 288 | 122.27 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 321 | 122.39 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 337 | 122.44 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 343 | 122.45 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 358 | 122.48 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 416 | 122.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 442 | 122.74 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 464 | 122.82 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 770 | 123.70 | temperature | 15 | 4320 | > th | dose dependent | sin | 14 | NA |
| 775 | 123.71 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 993 | 124.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 21 |