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Os01g0966700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Beta-fructofuranosidase (EC 3.2.1.26) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0129) R2 : 0.779
β1 : -0.772 (0.0474) R2dD : 0.134 R2D : 0.102
β2 : 1.2 (0.0325) R2dC : 0.667 R2C : 0.645
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.138 (0.0276) R2dN8 : 0.0161 R2N8 : -0.00802
σ : 0.243
deviance : 26.96
__
_____
C
peak time of C : 3.43
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
23.44 0.227 11.9 -0.776 0.912 0.45 0.334 -0.0121 -0.108 4.94 10.43 77 -- --
23.44 0.225 11.9 -0.775 0.913 0.45 0.33 -- -0.108 4.94 10.34 76 -- --
23.69 0.227 11.9 -0.778 0.911 0.459 -- 0.0629 -0.11 4.99 10.08 76 -- --
23.71 0.227 11.9 -0.778 0.911 0.461 -- -- -0.109 4.99 10.2 76 -- --
29.13 0.251 11.9 -0.701 -- 1.11 -- 0.0748 -0.134 -- 2.604 457 -- --
26.64 0.242 11.9 -0.767 1.2 -- 0.322 -- -0.136 3.44 -- -- -- --
26.96 0.243 11.9 -0.772 1.2 -- -- -- -0.138 3.43 -- -- -- --
28.99 0.251 11.9 -0.705 -- 1.13 -- -- -0.081 -- 2.565 460 -- --
39.12 0.291 11.9 -- 0.906 0.437 -- -- -0.0253 4.76 15.96 78 -- --
108.29 0.486 11.9 -0.721 -- -- -- -- -0.106 -- -- -- -- --
42.68 0.306 11.9 -- 1.19 -- -- -- -0.0515 3.44 -- -- -- --
41.78 0.301 11.9 -- -- 1.12 -- -- -0.0274 -- 0.8363 457 -- --
122.02 0.516 11.9 -- -- -- -- -- -0.0256 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.80 temperature 10 720 > th dose dependent rect. 1 4
4 23.18 radiation 1 90 > th dose independent rect. 6 11
6 23.22 humidity 60 720 > th dose independent rect. 10 1
9 23.31 radiation 10 30 < th dose dependent rect. 23 23
11 23.35 radiation 10 90 < th dose dependent rect. 17 16
13 23.35 radiation 10 90 < th dose dependent rect. 13 21
14 23.37 temperature 30 720 < th dose dependent rect. 5 2
17 23.38 radiation 10 90 < th dose dependent rect. 15 19
21 23.40 humidity 60 720 > th dose independent rect. 1 10
26 23.42 radiation 10 90 < th dose dependent rect. 17 23
27 23.43 humidity 50 720 > th dose independent rect. 17 20
31 23.45 atmosphere 1015 14400 > th dose dependent rect. 15 9
34 23.45 radiation 10 90 < th dose dependent rect. 15 22
35 23.46 humidity 80 43200 > th dose dependent rect. 22 1
37 23.46 atmosphere 1015 14400 > th dose dependent rect. 17 6
57 23.48 radiation 10 90 < th dose dependent rect. 17 20
59 23.49 atmosphere 1015 14400 > th dose dependent rect. 22 1
77 23.52 radiation 10 90 < th dose dependent no NA NA
89 23.53 radiation 10 90 < th dose dependent rect. 9 23
90 23.54 humidity 50 14400 > th dose independent sin 9 NA
91 23.54 humidity 50 14400 < th dose independent sin 9 NA
96 23.55 humidity 60 14400 > th dose independent rect. 4 5
99 23.55 humidity 80 43200 > th dose independent rect. 12 12
100 23.55 radiation 1 90 < th dose independent rect. 3 16
101 23.55 humidity 80 14400 > th dose dependent rect. 5 1
108 23.56 humidity 50 720 > th dose independent rect. 8 6
110 23.56 humidity 50 14400 > th dose independent rect. 4 8
115 23.56 humidity 60 270 > th dose independent rect. 24 13
116 23.56 atmosphere 1010 14400 > th dose dependent rect. 11 1
118 23.56 humidity 60 14400 < th dose dependent rect. 8 2
122 23.56 humidity 80 43200 > th dose dependent rect. 20 4
139 23.56 radiation 10 90 < th dose dependent rect. 7 23
144 23.57 radiation 1 90 > th dose independent sin 1 NA
145 23.57 humidity 50 14400 > th dose independent rect. 11 1
147 23.57 humidity 50 14400 > th dose independent rect. 9 4
163 23.57 humidity 50 14400 < th dose dependent sin 9 NA
164 23.57 humidity 60 14400 > th dose dependent rect. 5 1
177 23.58 atmosphere 1015 14400 > th dose independent rect. 23 1
179 23.58 humidity 50 14400 < th dose independent rect. 10 2
204 23.58 humidity 60 14400 > th dose independent rect. 20 13
253 23.59 humidity 80 43200 > th dose independent sin 18 NA
255 23.59 humidity 50 14400 < th dose independent sin 3 NA
258 23.59 atmosphere 1015 14400 < th dose independent rect. 23 1
311 23.59 radiation 30 90 < th dose dependent rect. 11 19
314 23.59 humidity 50 14400 < th dose dependent rect. 16 22
319 23.60 humidity 60 14400 < th dose independent rect. 7 2
375 23.60 atmosphere 1010 14400 > th dose dependent sin 20 NA
381 23.60 atmosphere 1010 14400 > th dose dependent rect. 17 1
387 23.60 radiation 1 43200 < th dose dependent rect. 23 5
462 23.61 wind 1 14400 < th dose independent rect. 12 1
463 23.61 humidity 60 14400 > th dose independent rect. 8 1
473 23.61 atmosphere 1015 14400 > th dose independent rect. 15 6
478 23.61 humidity 80 43200 < th dose independent rect. 12 12
565 23.62 humidity 80 43200 < th dose independent sin 18 NA
567 23.62 radiation 1 90 < th dose independent sin 1 NA
594 23.62 humidity 80 43200 < th dose independent rect. 1 18
600 23.62 humidity 50 14400 < th dose dependent sin 4 NA
602 23.62 atmosphere 1010 14400 > th dose dependent sin 17 NA
606 23.62 humidity 50 14400 < th dose dependent rect. 13 1
611 23.62 humidity 50 14400 > th dose dependent rect. 1 3
619 23.62 humidity 80 14400 > th dose dependent rect. 1 5
687 23.63 humidity 50 14400 < th dose independent rect. 13 2
713 23.63 atmosphere 1010 14400 > th dose dependent no NA NA
789 23.63 atmosphere 1010 14400 > th dose dependent rect. 21 21
802 23.63 atmosphere 1010 14400 > th dose dependent rect. 15 22
805 23.63 atmosphere 1010 14400 > th dose dependent rect. 19 22
833 23.63 radiation 10 90 < th dose dependent rect. 1 23
859 23.64 humidity 50 14400 < th dose dependent sin 1 NA
863 23.64 atmosphere 1010 14400 > th dose dependent rect. 6 1
921 23.64 atmosphere 1010 14400 > th dose dependent rect. 19 18
930 23.64 atmosphere 1010 14400 > th dose dependent rect. 15 19
976 23.65 atmosphere 1015 14400 > th dose independent rect. 16 8
981 23.65 wind 7 90 < th dose independent rect. 17 13
985 23.65 atmosphere 1010 14400 > th dose dependent sin 13 NA