Os01g0965900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0965900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.33 | 0.466 | 11.1 | -0.229 | 1.66 | -0.949 | 0.161 | -1.39 | -0.413 | 8.03 | 20.8 | 1612 | -- | -- |
| 102.09 | 0.471 | 11.1 | 0.0511 | 1.65 | -0.797 | 0.253 | -- | -0.342 | 8.02 | 20.97 | 1642 | -- | -- |
| 98.39 | 0.462 | 11.1 | -0.234 | 1.66 | -0.925 | -- | -1.36 | -0.413 | 8.03 | 20.9 | 1609 | -- | -- |
| 102.15 | 0.471 | 11.1 | 0.0741 | 1.66 | -0.795 | -- | -- | -0.344 | 8.02 | 21 | 1643 | -- | -- |
| 234.7 | 0.714 | 11.1 | -0.265 | -- | -0.858 | -- | -0.928 | -0.319 | -- | 21.9 | 714 | -- | -- |
| 117.33 | 0.508 | 11.1 | -0.28 | 1.67 | -- | 0.256 | -- | -0.547 | 8.04 | -- | -- | -- | -- |
| 117.53 | 0.508 | 11.1 | -0.274 | 1.67 | -- | -- | -- | -0.547 | 8.03 | -- | -- | -- | -- |
| 186.42 | 0.636 | 11.2 | 0.0755 | -- | -1.26 | -- | -- | -0.217 | -- | 25.9 | 616 | -- | -- |
| 102.26 | 0.471 | 11.1 | -- | 1.66 | -0.765 | -- | -- | -0.359 | 8.02 | 20.91 | 1640 | -- | -- |
| 269.48 | 0.767 | 11.2 | -0.258 | -- | -- | -- | -- | -0.526 | -- | -- | -- | -- | -- |
| 119.5 | 0.511 | 11.1 | -- | 1.67 | -- | -- | -- | -0.517 | 8.04 | -- | -- | -- | -- |
| 185.7 | 0.635 | 11.1 | -- | -- | -1.3 | -- | -- | -0.206 | -- | 25.89 | 620 | -- | -- |
| 271.23 | 0.769 | 11.2 | -- | -- | -- | -- | -- | -0.497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.78 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 11 | 96.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 13 | 96.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 14 | 96.84 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 19 | 97.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 21 | 97.21 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 27 | 97.49 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 18 |
| 53 | 98.23 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 80 | 98.50 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 120 | 98.82 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 138 | 98.93 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 17 |
| 170 | 99.11 | temperature | 20 | 1440 | > th | dose independent | sin | 5 | NA |
| 173 | 99.13 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 225 | 99.34 | wind | 3 | 14400 | < th | dose dependent | sin | 10 | NA |
| 237 | 99.39 | temperature | 20 | 270 | > th | dose independent | rect. | 16 | 9 |
| 239 | 99.40 | temperature | 20 | 1440 | < th | dose independent | sin | 5 | NA |
| 245 | 99.41 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 19 |
| 316 | 99.69 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 347 | 99.78 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 359 | 99.83 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 8 |
| 387 | 99.94 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 390 | 99.95 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 8 |
| 467 | 100.18 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 479 | 100.21 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 8 |
| 482 | 100.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 503 | 100.30 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 19 |
| 525 | 100.34 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 19 |
| 542 | 100.40 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 556 | 100.42 | wind | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 567 | 100.44 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 7 |
| 571 | 100.45 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 589 | 100.49 | wind | 1 | 14400 | > th | dose independent | sin | 4 | NA |
| 611 | 100.54 | wind | 1 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 655 | 100.63 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 710 | 100.71 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 21 |
| 717 | 100.73 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 739 | 100.75 | temperature | 10 | 90 | > th | dose dependent | sin | 9 | NA |
| 740 | 100.75 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 750 | 100.77 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 777 | 100.82 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 13 |
| 782 | 100.82 | temperature | 20 | 1440 | > th | dose independent | rect. | 10 | 21 |
| 797 | 100.84 | temperature | 20 | 10 | > th | dose independent | rect. | 21 | 15 |
| 819 | 100.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 4 |
| 821 | 100.88 | wind | 1 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 853 | 100.91 | wind | 1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 864 | 100.92 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 895 | 100.95 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 4 |
| 913 | 100.98 | wind | 1 | 14400 | < th | dose independent | sin | 4 | NA |
| 935 | 100.99 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 19 |
| 986 | 101.05 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 22 |
| 998 | 101.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 22 |