Os01g0963000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase BP 1 precursor.
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Os01g0963000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase BP 1 precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1032.81 | 1.51 | 8.68 | -4.04 | 2.78 | -3.73 | 1.46 | -3.56 | -2.87 | 2.27 | 77.94 | 1032 | 6.06 | -- |
| 1045.23 | 1.51 | 8.65 | -3.75 | 2.9 | -4.02 | 0.728 | -- | -2.88 | 2.13 | 78 | 988 | 6.19 | -- |
| 1039.33 | 1.5 | 8.68 | -4.05 | 2.8 | -3.74 | -- | -2.78 | -2.89 | 2.32 | 78 | 1032 | 6.19 | -- |
| 1047.04 | 1.51 | 8.65 | -3.78 | 2.9 | -4.01 | -- | -- | -2.88 | 2.17 | 78 | 986 | 6.16 | -- |
| 1260.47 | 1.65 | 8.61 | -4.55 | -- | -3.16 | -- | -4.33 | -2.65 | -- | 85 | 1558 | 9.99 | -- |
| 1534.45 | 1.84 | 8.54 | -4.24 | 1.64 | -- | 0.0731 | -- | -2.43 | 2.43 | -- | -- | -- | -- |
| 1534.47 | 1.83 | 8.54 | -4.24 | 1.64 | -- | -- | -- | -2.43 | 2.44 | -- | -- | -- | -- |
| 1243.65 | 1.64 | 8.45 | -4.09 | -- | -4.17 | -- | -- | -2.28 | -- | 100.8 | 1652 | 16.6 | -- |
| 1408.49 | 1.75 | 8.55 | -- | 2.72 | -4.52 | -- | -- | -2.53 | 1.78 | 77 | 946 | 5.25 | -- |
| 1693.37 | 1.92 | 8.53 | -4.17 | -- | -- | -- | -- | -2.39 | -- | -- | -- | -- | -- |
| 2009.03 | 2.1 | 8.43 | -- | 1.56 | -- | -- | -- | -1.96 | 2.39 | -- | -- | -- | -- |
| 1549.13 | 1.83 | 8.35 | -- | -- | -5.51 | -- | -- | -1.88 | -- | 226.6 | 1490 | 15.9 | -- |
| 2152.89 | 2.17 | 8.42 | -- | -- | -- | -- | -- | -1.93 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1032.32 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 6 | 1068.62 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 11 | 1077.83 | humidity | 90 | 1440 | < th | dose dependent | rect. | 15 | 7 |
| 17 | 1081.40 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 18 | 1081.54 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 17 |
| 26 | 1083.64 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |
| 31 | 1085.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 42 | 1086.79 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 13 |
| 66 | 1088.98 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 118 | 1093.66 | humidity | 90 | 1440 | < th | dose dependent | sin | 17 | NA |
| 126 | 1093.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 131 | 1094.75 | humidity | 50 | 1440 | > th | dose dependent | sin | 18 | NA |
| 141 | 1095.39 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 153 | 1096.42 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 156 | 1096.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 172 | 1097.33 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 198 | 1098.84 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 222 | 1099.62 | temperature | 25 | 1440 | > th | dose dependent | sin | 17 | NA |
| 233 | 1100.33 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 289 | 1102.48 | humidity | 80 | 720 | > th | dose independent | rect. | 18 | 4 |
| 315 | 1103.19 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 338 | 1104.18 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 7 |
| 370 | 1105.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 465 | 1108.47 | humidity | 80 | 720 | > th | dose independent | rect. | 16 | 6 |
| 466 | 1108.48 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 8 |
| 471 | 1108.65 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 498 | 1109.32 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 508 | 1109.48 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 524 | 1109.99 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 16 |
| 536 | 1110.24 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 565 | 1110.96 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 18 |
| 566 | 1110.99 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 567 | 1111.07 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 569 | 1111.12 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 581 | 1111.45 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 588 | 1111.56 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 597 | 1111.87 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 607 | 1112.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 620 | 1112.61 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 10 |
| 624 | 1112.75 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 15 |
| 627 | 1112.78 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 18 |
| 631 | 1112.84 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 20 |
| 677 | 1113.78 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 678 | 1113.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 714 | 1114.29 | wind | 9 | 43200 | < th | dose independent | rect. | 11 | 19 |
| 716 | 1114.31 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 827 | 1117.67 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 978 | 1120.85 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 982 | 1120.92 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 992 | 1121.28 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |