Os01g0962700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase 12 precursor (EC 1.11.1.7) (Atperox P12) (PRXR6) (ATP4a).
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Os01g0962700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase 12 precursor (EC 1.11.1.7) (Atperox P12) (PRXR6) (ATP4a).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 300.65 | 0.815 | 10.9 | -2.55 | 2.36 | -2.59 | 1.86 | 0.275 | 0.0487 | 22.5 | 25.41 | 1444 | -- | -- |
| 300.7 | 0.808 | 10.9 | -2.61 | 2.37 | -2.57 | 1.86 | -- | 0.0517 | 22.5 | 25.4 | 1446 | -- | -- |
| 314.67 | 0.826 | 10.9 | -2.58 | 2.34 | -2.6 | -- | 0.451 | 0.052 | 22.5 | 25.4 | 1461 | -- | -- |
| 314.79 | 0.826 | 10.9 | -2.69 | 2.34 | -2.56 | -- | -- | 0.0354 | 22.5 | 25.4 | 1461 | -- | -- |
| 646.05 | 1.18 | 10.8 | -2.7 | -- | -2.55 | -- | 0.0205 | 0.0514 | -- | 25.3 | 1531 | -- | -- |
| 594.62 | 1.14 | 11 | -3.55 | 2.23 | -- | 1.69 | -- | -0.244 | 22.2 | -- | -- | -- | -- |
| 606.03 | 1.15 | 11 | -3.62 | 2.22 | -- | -- | -- | -0.249 | 22.3 | -- | -- | -- | -- |
| 646.04 | 1.18 | 10.8 | -2.71 | -- | -2.55 | -- | -- | 0.0362 | -- | 25.3 | 1531 | -- | -- |
| 499.93 | 1.04 | 10.8 | -- | 2.32 | -3.01 | -- | -- | 0.536 | 22.4 | 23.7 | 1510 | -- | -- |
| 906.42 | 1.41 | 10.9 | -3.58 | -- | -- | -- | -- | -0.243 | -- | -- | -- | -- | -- |
| 951.04 | 1.44 | 10.9 | -- | 2.21 | -- | -- | -- | 0.154 | 22.1 | -- | -- | -- | -- |
| 647.05 | 1.18 | 10.5 | -- | -- | -4.19 | -- | -- | 1.55 | -- | 20.34 | 20324 | -- | -- |
| 1245.39 | 1.65 | 10.8 | -- | -- | -- | -- | -- | 0.154 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 273.52 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 4 | 274.20 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 17 | 275.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 19 | 275.84 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 8 |
| 22 | 275.85 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 16 |
| 23 | 275.85 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 18 |
| 34 | 275.92 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 118 | 277.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 120 | 277.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 121 | 277.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 124 | 277.14 | temperature | 30 | 14400 | < th | dose independent | rect. | 20 | 21 |
| 129 | 277.15 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 19 |
| 138 | 277.33 | temperature | 30 | 14400 | < th | dose independent | sin | 18 | NA |
| 144 | 277.44 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 19 |
| 238 | 278.24 | temperature | 30 | 14400 | > th | dose independent | sin | 18 | NA |
| 333 | 278.91 | temperature | 25 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 350 | 278.99 | temperature | 25 | 14400 | > th | dose dependent | sin | 15 | NA |
| 355 | 279.04 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 19 |
| 356 | 279.04 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 21 |
| 361 | 279.05 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 373 | 279.06 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 14 |
| 391 | 279.06 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 22 |
| 396 | 279.07 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 474 | 279.16 | temperature | 25 | 14400 | > th | dose dependent | rect. | 4 | 19 |
| 557 | 279.71 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 559 | 279.71 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 633 | 280.09 | temperature | 25 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 639 | 280.13 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 751 | 280.32 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 9 |
| 840 | 280.90 | temperature | 25 | 14400 | > th | dose dependent | sin | 7 | NA |
| 847 | 280.91 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 872 | 281.16 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 889 | 281.34 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 916 | 281.69 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 969 | 282.42 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |