Os01g0960500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Copine domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0960500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Copine domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.43 | 0.327 | 12.3 | 0.183 | 1.46 | -1.86 | -0.414 | 0.206 | 0.215 | 7.61 | 16.63 | 96 | -- | -- |
| 48.48 | 0.324 | 12.3 | 0.159 | 1.46 | -1.86 | -0.43 | -- | 0.21 | 7.6 | 16.64 | 96 | -- | -- |
| 48.9 | 0.326 | 12.3 | 0.168 | 1.46 | -1.83 | -- | 0.217 | 0.212 | 7.56 | 16.7 | 95 | -- | -- |
| 48.93 | 0.326 | 12.3 | 0.132 | 1.47 | -1.83 | -- | -- | 0.204 | 7.56 | 16.5 | 91 | -- | -- |
| 118.43 | 0.507 | 12.3 | 0.711 | -- | -2.5 | -- | 1.92 | 0.463 | -- | 18.93 | 401 | -- | -- |
| 89.14 | 0.443 | 12.4 | -0.275 | 1.79 | -- | 0.233 | -- | -0.0824 | 6.39 | -- | -- | -- | -- |
| 89.27 | 0.442 | 12.4 | -0.271 | 1.79 | -- | -- | -- | -0.083 | 6.4 | -- | -- | -- | -- |
| 120.95 | 0.512 | 12.3 | 0.358 | -- | -2.5 | -- | -- | 0.363 | -- | 18 | 384 | -- | -- |
| 49.36 | 0.327 | 12.3 | -- | 1.48 | -1.76 | -- | -- | 0.187 | 7.53 | 16.8 | 87 | -- | -- |
| 255.02 | 0.746 | 12.4 | -0.225 | -- | -- | -- | -- | -0.0452 | -- | -- | -- | -- | -- |
| 91.21 | 0.447 | 12.4 | -- | 1.78 | -- | -- | -- | -0.0528 | 6.41 | -- | -- | -- | -- |
| 123.97 | 0.519 | 12.3 | -- | -- | -2.34 | -- | -- | 0.309 | -- | 18.6 | 384 | -- | -- |
| 256.36 | 0.747 | 12.4 | -- | -- | -- | -- | -- | -0.0202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.60 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 2 | 44.83 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 3 | 44.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 51 | 48.59 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 78 | 49.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 88 | 49.91 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 94 | 50.01 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 95 | 50.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 108 | 50.47 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 138 | 51.05 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 172 | 51.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 191 | 52.21 | temperature | 20 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 206 | 52.38 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 278 | 53.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 21 |
| 287 | 53.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 329 | 53.99 | temperature | 10 | 90 | > th | dose dependent | sin | 23 | NA |
| 458 | 55.10 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 459 | 55.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 460 | 55.10 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 479 | 55.26 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |
| 536 | 55.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 14 |
| 793 | 56.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 870 | 57.19 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 887 | 57.26 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 952 | 57.53 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |