Os01g0960300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucose inhibited division protein A.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0960300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Glucose inhibited division protein A.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.91 | 0.339 | 10.3 | 0.0417 | 0.534 | -0.894 | -0.602 | -0.982 | -0.48 | 22.4 | 29 | 350 | -- | -- |
| 52.49 | 0.337 | 10.3 | -0.0741 | 0.541 | -0.973 | -0.649 | -- | -0.517 | 22.6 | 28.9 | 360 | -- | -- |
| 53.15 | 0.34 | 10.3 | 0.0931 | 0.556 | -0.842 | -- | -1.13 | -0.477 | 22.4 | 28.74 | 332 | -- | -- |
| 53.92 | 0.342 | 10.3 | -0.0609 | 0.541 | -0.943 | -- | -- | -0.511 | 22.4 | 28.9 | 349 | -- | -- |
| 66.48 | 0.38 | 10.3 | 0.141 | -- | -0.945 | -- | -1.29 | -0.492 | -- | 28 | 509 | -- | -- |
| 77.35 | 0.412 | 10.3 | 0.101 | 0.811 | -- | 0.00555 | -- | -0.427 | 19.8 | -- | -- | -- | -- |
| 77.35 | 0.412 | 10.3 | 0.101 | 0.811 | -- | -- | -- | -0.427 | 19.8 | -- | -- | -- | -- |
| 67.72 | 0.383 | 10.3 | -0.0894 | -- | -1.09 | -- | -- | -0.539 | -- | 28.52 | 525 | -- | -- |
| 54.01 | 0.342 | 10.3 | -- | 0.547 | -0.932 | -- | -- | -0.502 | 22.3 | 28.92 | 347 | -- | -- |
| 113.02 | 0.497 | 10.3 | 0.0913 | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
| 77.61 | 0.412 | 10.3 | -- | 0.811 | -- | -- | -- | -0.438 | 19.8 | -- | -- | -- | -- |
| 67.92 | 0.384 | 10.3 | -- | -- | -1.08 | -- | -- | -0.529 | -- | 28.55 | 525 | -- | -- |
| 113.24 | 0.497 | 10.3 | -- | -- | -- | -- | -- | -0.448 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.85 | temperature | 25 | 270 | > th | dose dependent | sin | 1 | NA |
| 4 | 52.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 4 |
| 5 | 52.49 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 7 | 52.56 | temperature | 25 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 8 | 52.59 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 18 |
| 10 | 52.62 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 12 | 52.63 | temperature | 25 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 61 | 53.23 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 64 | 53.24 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 16 |
| 122 | 53.52 | temperature | 25 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 142 | 53.59 | temperature | 25 | 270 | > th | dose dependent | no | NA | NA |
| 210 | 53.76 | temperature | 25 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 308 | 54.22 | temperature | 25 | 720 | > th | dose dependent | sin | 6 | NA |
| 333 | 54.35 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 5 |
| 532 | 55.30 | temperature | 25 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 764 | 56.24 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 1 |