Os01g0959200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Anth (Pollen-specific desiccation-associated LLA23 protein).
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Os01g0959200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Anth (Pollen-specific desiccation-associated LLA23 protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 397.54 | 0.937 | 6.85 | 1.38 | 0.474 | -2.42 | -1.25 | 0.757 | 1.13 | 0.356 | 25 | 1374 | 17.1 | 4.95 |
| 397.09 | 0.928 | 6.84 | 1.1 | 0.506 | -2.47 | -1.3 | -- | 1.11 | 1.1 | 25.04 | 1345 | 16.8 | 5.2 |
| 403.02 | 0.935 | 6.84 | 1.41 | 0.487 | -2.47 | -- | 0.698 | 1.14 | 0.615 | 25 | 1350 | 16.9 | 5.13 |
| 403.68 | 0.936 | 6.85 | 1.12 | 0.509 | -2.42 | -- | -- | 1.07 | 0.768 | 25.05 | 1348 | 16.8 | 5.18 |
| 417.66 | 0.952 | 6.85 | 1.36 | -- | -2.43 | -- | 0.59 | 1.12 | -- | 25 | 1355 | 16.9 | 5.15 |
| 751.59 | 1.29 | 7.18 | 0.306 | 0.532 | -- | -0.93 | -- | -0.283 | 21.7 | -- | -- | -- | -- |
| 754.05 | 1.29 | 7.18 | 0.346 | 0.56 | -- | -- | -- | -0.278 | 20.9 | -- | -- | -- | -- |
| 418.36 | 0.953 | 6.85 | 1.15 | -- | -2.41 | -- | -- | 1.05 | -- | 25.1 | 1355 | 16.9 | 5.22 |
| 433.12 | 0.969 | 6.9 | -- | 0.47 | -2.26 | -- | -- | 0.947 | 0.886 | 25.09 | 1359 | 17.3 | 4.12 |
| 771.99 | 1.3 | 7.16 | 0.346 | -- | -- | -- | -- | -0.282 | -- | -- | -- | -- | -- |
| 757.21 | 1.29 | 7.19 | -- | 0.56 | -- | -- | -- | -0.317 | 20.9 | -- | -- | -- | -- |
| 447.85 | 0.986 | 6.9 | -- | -- | -2.19 | -- | -- | 0.832 | -- | 25.07 | 1360 | 17.3 | 4.2 |
| 775.15 | 1.3 | 7.17 | -- | -- | -- | -- | -- | -0.32 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 414.35 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 2 | 416.92 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 8 | 423.77 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 9 | 423.97 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 14 | 425.17 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 45 | 445.26 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 46 | 445.46 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 47 | 445.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 60 | 446.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 69 | 447.82 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 75 | 448.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 100 | 449.45 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 104 | 449.66 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 141 | 451.74 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 191 | 454.02 | temperature | 20 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 220 | 454.79 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 222 | 454.84 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 298 | 456.78 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 335 | 457.69 | temperature | 25 | 1440 | > th | dose independent | rect. | 2 | 21 |
| 349 | 458.15 | temperature | 20 | 14400 | > th | dose independent | sin | 13 | NA |
| 353 | 458.21 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 18 |
| 359 | 458.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 360 | 458.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 418 | 459.36 | temperature | 20 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 424 | 459.40 | temperature | 20 | 14400 | < th | dose independent | sin | 13 | NA |
| 429 | 459.49 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 459 | 460.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 4 |
| 469 | 460.12 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 511 | 460.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 6 |
| 565 | 461.34 | temperature | 25 | 1440 | < th | dose independent | rect. | 3 | 20 |
| 576 | 461.54 | temperature | 20 | 14400 | > th | dose dependent | sin | 13 | NA |
| 617 | 461.94 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 749 | 463.10 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 750 | 463.10 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 860 | 464.11 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 886 | 464.30 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 14 |
| 971 | 465.02 | temperature | 25 | 14400 | < th | dose independent | sin | 17 | NA |
| 984 | 465.08 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 996 | 465.19 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |