Os01g0959100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Abscisic stress ripening protein 1.
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Os01g0959100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Abscisic stress ripening protein 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 622.05 | 1.17 | 4.81 | 2.74 | 0.558 | -2.47 | 0.378 | 0.758 | 0.348 | 16.7 | 25.6 | 8740 | 14.2 | -- |
| 619.83 | 1.16 | 4.84 | 2.64 | 0.615 | -2.5 | 0.423 | -- | 0.318 | 16.7 | 25.63 | 8732 | 16.2 | -- |
| 618.84 | 1.16 | 4.81 | 2.79 | 0.57 | -2.48 | -- | 0.635 | 0.373 | 16.8 | 25.74 | 8726 | 16.4 | -- |
| 619.12 | 1.16 | 4.81 | 2.68 | 0.546 | -2.5 | -- | -- | 0.391 | 16.6 | 26.04 | 8721 | 17.5 | -- |
| 633.09 | 1.17 | 4.8 | 2.73 | -- | -2.51 | -- | 0.568 | 0.354 | -- | 25.73 | 8567 | 15.7 | -- |
| 852.61 | 1.37 | 5.09 | 1.08 | 0.619 | -- | 0.636 | -- | -0.8 | 16.2 | -- | -- | -- | -- |
| 853.67 | 1.37 | 5.08 | 1.09 | 0.626 | -- | -- | -- | -0.796 | 16.4 | -- | -- | -- | -- |
| 633.48 | 1.17 | 4.83 | 2.53 | -- | -2.5 | -- | -- | 0.289 | -- | 25.78 | 8567 | 15.7 | -- |
| 746.84 | 1.27 | 5 | -- | 0.415 | -1.85 | -- | -- | -0.435 | 16.5 | 26.7 | 7098 | 14 | -- |
| 874.71 | 1.38 | 5.08 | 1.06 | -- | -- | -- | -- | -0.813 | -- | -- | -- | -- | -- |
| 884.92 | 1.39 | 5.11 | -- | 0.606 | -- | -- | -- | -0.917 | 16.5 | -- | -- | -- | -- |
| 757.87 | 1.28 | 5 | -- | -- | -1.87 | -- | -- | -0.453 | -- | 26.7 | 7005 | 12.9 | -- |
| 904.59 | 1.4 | 5.11 | -- | -- | -- | -- | -- | -0.931 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 615.96 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 2 | 615.99 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 3 | 616.81 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 5 | 616.96 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 9 | 617.52 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 82 | 626.68 | temperature | 20 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 105 | 628.80 | temperature | 20 | 14400 | < th | dose independent | sin | 16 | NA |
| 111 | 629.28 | temperature | 20 | 14400 | > th | dose independent | sin | 16 | NA |
| 147 | 631.92 | temperature | 20 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 236 | 636.62 | temperature | 20 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 252 | 637.36 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 262 | 637.92 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 302 | 639.24 | temperature | 20 | 14400 | > th | dose dependent | rect. | 18 | 7 |
| 306 | 639.37 | temperature | 20 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 320 | 639.64 | temperature | 20 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 401 | 640.95 | temperature | 20 | 14400 | > th | dose dependent | rect. | 23 | 5 |
| 427 | 641.34 | temperature | 20 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 473 | 641.86 | temperature | 20 | 14400 | > th | dose dependent | sin | 12 | NA |
| 510 | 642.40 | temperature | 25 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 544 | 642.73 | temperature | 25 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 602 | 643.43 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 609 | 643.49 | temperature | 25 | 14400 | < th | dose dependent | rect. | 17 | 7 |
| 698 | 644.34 | temperature | 20 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 953 | 646.63 | temperature | 25 | 14400 | < th | dose dependent | sin | 17 | NA |
| 958 | 646.67 | temperature | 25 | 14400 | < th | dose dependent | rect. | 10 | 16 |
| 996 | 647.03 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |