Os01g0958000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cell division control protein 2 homolog 2 (EC 2.7.1.37) (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0958000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cell division control protein 2 homolog 2 (EC 2.7.1.37) (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.94 | 0.188 | 13.1 | -0.0846 | 0.488 | 0.4 | 0.183 | 0.422 | 0.224 | 1.76 | 21.5 | 1423 | -- | -- |
| 16.22 | 0.188 | 13.1 | -0.191 | 0.488 | 0.366 | 0.224 | -- | 0.203 | 1.91 | 21.41 | 2095 | -- | -- |
| 16.06 | 0.187 | 13.1 | -0.0858 | 0.487 | 0.398 | -- | 0.433 | 0.225 | 1.79 | 21.5 | 1404 | -- | -- |
| 16.33 | 0.188 | 13.1 | -0.225 | 0.482 | 0.379 | -- | -- | 0.19 | 1.96 | 21.44 | 2090 | -- | -- |
| 28.9 | 0.25 | 13.1 | -0.0853 | -- | 0.422 | -- | 0.32 | 0.202 | -- | 21.9 | 1022 | -- | -- |
| 20.29 | 0.211 | 13.1 | -0.042 | 0.501 | -- | 0.168 | -- | 0.305 | 1.78 | -- | -- | -- | -- |
| 20.4 | 0.212 | 13.1 | -0.0474 | 0.501 | -- | -- | -- | 0.304 | 1.81 | -- | -- | -- | -- |
| 29.18 | 0.252 | 13.1 | -0.175 | -- | 0.403 | -- | -- | 0.186 | -- | 22 | 1017 | -- | -- |
| 17.43 | 0.194 | 13.1 | -- | 0.485 | 0.292 | -- | -- | 0.232 | 1.87 | 21.45 | 1920 | -- | -- |
| 35.62 | 0.279 | 13.1 | -0.0268 | -- | -- | -- | -- | 0.316 | -- | -- | -- | -- | -- |
| 20.46 | 0.212 | 13.1 | -- | 0.5 | -- | -- | -- | 0.31 | 1.81 | -- | -- | -- | -- |
| 29.2 | 0.252 | 13.1 | -- | -- | 0.344 | -- | -- | 0.203 | -- | 24.7 | 1034 | -- | -- |
| 35.64 | 0.279 | 13.1 | -- | -- | -- | -- | -- | 0.319 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 2 | 15.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 3 | 15.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 4 | 15.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 6 | 16.06 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 7 | 16.08 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 8 | 16.09 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 9 | 16.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 15 | 16.13 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 9 |
| 17 | 16.14 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 29 | 16.17 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 36 | 16.20 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 42 | 16.21 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 64 | 16.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 65 | 16.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 3 |
| 72 | 16.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 85 | 16.29 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 15 |
| 86 | 16.29 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 117 | 16.32 | temperature | 20 | 1440 | > th | dose independent | sin | 8 | NA |
| 143 | 16.34 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 151 | 16.34 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 218 | 16.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 220 | 16.40 | temperature | 20 | 1440 | < th | dose independent | sin | 8 | NA |
| 236 | 16.41 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 276 | 16.43 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 301 | 16.45 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 4 |
| 336 | 16.47 | wind | 3 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 338 | 16.47 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 391 | 16.50 | wind | 3 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 404 | 16.51 | wind | 3 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 460 | 16.53 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 479 | 16.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 492 | 16.55 | wind | 3 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 515 | 16.56 | wind | 9 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 532 | 16.57 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 547 | 16.57 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 552 | 16.57 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 15 |
| 610 | 16.59 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 648 | 16.61 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 672 | 16.62 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 22 |
| 770 | 16.66 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 23 |
| 816 | 16.68 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 23 |
| 846 | 16.70 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 905 | 16.72 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 906 | 16.72 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 928 | 16.72 | humidity | 90 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 940 | 16.72 | temperature | 25 | 270 | < th | dose dependent | rect. | 12 | 21 |
| 999 | 16.75 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 1000 | 16.75 | temperature | 20 | 270 | < th | dose independent | sin | 12 | NA |