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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0957600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Elicitor-inducible cytochrome P450.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.29 (0.0219) R2 : 0.000217
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0145 (0.046) R2dN8 : 0.00028 R2N8 : 0.000217
σ : 0.412
deviance : 77.88
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.41 0.4 3.3 0.228 0.195 -0.205 -0.147 -1.11 0.00691 6.69 70.77 6532 -- --
73.79 0.4 3.32 0.19 0.206 -0.242 -0.0887 -- -0.0662 6.61 83.01 7313 -- --
72.47 0.396 3.3 0.228 0.194 -0.202 -- -1.12 0.0079 6.73 70.64 6530 -- --
73.54 0.399 3.32 0.184 0.186 -0.334 -- -- -0.12 6.38 83.01 7303 -- --
74.32 0.402 3.3 0.234 -- -0.129 -- -1.23 0.0247 -- 70.99 6561 -- --
75.54 0.407 3.29 0.142 0.179 -- -0.253 -- 0.0258 6.45 -- -- -- --
75.7 0.407 3.29 0.139 0.178 -- -- -- 0.0266 6.45 -- -- -- --
75.22 0.404 3.32 0.193 -- -0.328 -- -- -0.115 -- 83 7225 -- --
74.46 0.402 3.32 -- 0.186 -0.296 -- -- -0.126 6.28 83 7309 -- --
77.34 0.411 3.29 0.143 -- -- -- -- 0.0304 -- -- -- -- --
76.2 0.408 3.29 -- 0.18 -- -- -- 0.0112 6.4 -- -- -- --
76.19 0.407 3.32 -- -- -0.297 -- -- -0.124 -- 83 7224 -- --
77.88 0.412 3.29 -- -- -- -- -- 0.0145 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.08 atmosphere 1000.0 10 > th dose independent rect. 21 23
3 66.83 humidity 90.0 10 < th dose dependent rect. 20 1
6 66.97 atmosphere 1005.0 10 > th dose independent rect. 20 1
8 66.98 radiation 1.0 1440 < th dose dependent rect. 21 1
9 66.99 humidity 90.0 10 < th dose independent rect. 20 1
10 67.11 temperature 20.0 10 > th dose independent rect. 20 1
11 67.12 temperature 30.0 30 < th dose dependent rect. 20 1
12 67.14 atmosphere 995.0 10 > th dose dependent rect. 20 1
15 67.17 wind 1.0 10 > th dose independent rect. 20 1
16 67.17 wind 9.0 10 < th dose independent rect. 20 1
17 67.17 temperature 10.0 10 > th dose independent rect. 20 1
19 67.17 temperature 30.0 10 < th dose independent rect. 20 1
20 67.17 humidity 50.0 10 > th dose independent rect. 20 1
24 67.17 atmosphere 1010.0 10 < th dose independent rect. 20 1
26 67.17 radiation 1.0 10 < th dose independent rect. 20 1
31 67.17 precipitation 0.1 10 < th dose independent rect. 20 1
32 67.17 temperature 10.0 10 > th dose independent rect. 21 23
33 67.17 radiation 1.0 10 < th dose dependent rect. 20 1
38 67.17 precipitation 0.1 10 < th dose dependent rect. 20 1
39 67.18 wind 5.0 10 < th dose independent rect. 20 1
40 67.18 wind 9.0 10 < th dose dependent rect. 20 1
43 67.20 temperature 10.0 10 > th dose dependent rect. 20 1
45 67.21 wind 5.0 30 < th dose dependent rect. 20 1
46 67.21 atmosphere 1015.0 30 < th dose dependent rect. 20 1
81 67.30 wind 1.0 30 > th dose dependent rect. 20 1
83 67.31 humidity 50.0 30 > th dose dependent rect. 20 1
97 67.42 temperature 10.0 1440 > th dose independent rect. 21 1
100 67.42 temperature 30.0 1440 < th dose independent rect. 21 1
104 67.42 humidity 50.0 1440 > th dose independent rect. 21 1
110 67.42 atmosphere 995.0 1440 > th dose independent rect. 21 1
111 67.42 radiation 1.0 1440 < th dose independent rect. 21 1
131 67.42 temperature 10.0 1440 > th dose independent rect. 22 23
142 67.47 radiation 40.0 14400 < th dose dependent rect. 21 1
160 67.69 precipitation 0.1 30 < th dose independent rect. 21 23
161 67.69 precipitation 0.1 30 < th dose dependent rect. 21 23
170 68.16 wind 9.0 30 < th dose independent rect. 21 23
182 68.86 humidity 50.0 30 > th dose independent rect. 21 23
190 69.45 precipitation 0.1 1440 < th dose independent rect. 21 1
191 69.45 precipitation 0.1 1440 < th dose dependent rect. 21 1
200 69.70 humidity 80.0 14400 < th dose dependent rect. 7 2
201 69.70 humidity 80.0 14400 < th dose dependent rect. 5 4
205 69.75 humidity 70.0 14400 > th dose independent rect. 8 1
214 69.98 humidity 70.0 14400 < th dose independent rect. 8 1
217 70.02 humidity 70.0 14400 > th dose independent rect. 4 5
219 70.02 humidity 70.0 14400 > th dose independent rect. 1 8
220 70.03 humidity 70.0 14400 > th dose independent rect. 6 3
230 70.08 radiation 10.0 30 > th dose independent rect. 6 2
253 70.31 humidity 70.0 14400 < th dose independent rect. 6 3
266 70.38 humidity 80.0 10 < th dose independent rect. 7 1
288 70.51 humidity 50.0 14400 > th dose independent rect. 15 1
313 70.62 wind 1.0 14400 < th dose dependent rect. 4 3
333 70.69 humidity 80.0 10 < th dose independent rect. 23 9
342 70.74 temperature 30.0 30 < th dose independent rect. 21 23
344 70.77 humidity 60.0 14400 < th dose dependent rect. 12 1
348 70.84 humidity 60.0 14400 < th dose dependent rect. 12 4
351 70.87 radiation 1.0 720 < th dose dependent rect. 21 8
377 70.90 humidity 60.0 14400 < th dose independent rect. 10 2
380 70.92 humidity 60.0 14400 < th dose dependent rect. 14 2
418 71.04 wind 1.0 14400 < th dose independent rect. 4 3
446 71.08 wind 1.0 14400 < th dose dependent rect. 6 1
448 71.09 wind 1.0 14400 > th dose independent rect. 4 3
449 71.09 atmosphere 1000.0 90 > th dose independent rect. 8 11
451 71.09 humidity 60.0 14400 < th dose dependent sin 0 NA
539 71.15 humidity 60.0 14400 < th dose dependent rect. 14 23
542 71.16 humidity 60.0 14400 < th dose dependent no NA NA
631 71.16 humidity 60.0 14400 < th dose dependent rect. 12 23
676 71.21 radiation 10.0 30 < th dose dependent rect. 21 23
679 71.22 humidity 60.0 14400 < th dose independent rect. 19 17
731 71.24 wind 1.0 10 < th dose independent rect. 6 21
773 71.26 wind 1.0 30 < th dose dependent rect. 23 4
792 71.28 wind 1.0 10 < th dose independent rect. 23 4
808 71.32 wind 1.0 14400 < th dose dependent rect. 2 5
820 71.35 humidity 90.0 90 < th dose independent rect. 1 7
828 71.37 humidity 60.0 14400 < th dose independent sin 8 NA
829 71.37 atmosphere 995.0 720 > th dose independent rect. 7 8
830 71.37 wind 1.0 10 < th dose independent rect. 14 13
832 71.37 atmosphere 1000.0 30 > th dose independent rect. 3 23
869 71.39 humidity 60.0 14400 > th dose independent rect. 10 2
882 71.43 humidity 50.0 14400 > th dose dependent rect. 8 1
885 71.44 humidity 60.0 14400 > th dose independent rect. 19 17
906 71.47 precipitation 0.1 720 < th dose independent rect. 5 16
908 71.47 humidity 50.0 14400 > th dose independent rect. 14 21
910 71.47 precipitation 0.1 720 < th dose dependent rect. 5 16
915 71.49 atmosphere 1000.0 720 > th dose independent rect. 21 8
916 71.49 precipitation 0.1 720 < th dose independent rect. 15 16
917 71.49 humidity 90.0 90 < th dose independent rect. 1 20
922 71.49 precipitation 0.1 720 < th dose dependent rect. 15 16
925 71.50 precipitation 0.1 720 < th dose independent rect. 9 8
926 71.50 wind 1.0 10 < th dose independent rect. 17 10
929 71.50 humidity 50.0 14400 > th dose independent rect. 14 17
932 71.50 precipitation 0.1 720 < th dose dependent rect. 9 8
934 71.51 humidity 50.0 14400 > th dose independent rect. 14 6
939 71.51 humidity 50.0 14400 > th dose independent rect. 14 15
943 71.51 radiation 10.0 30 < th dose independent rect. 21 23
952 71.52 humidity 80.0 14400 < th dose dependent sin 7 NA
954 71.52 atmosphere 1005.0 10 > th dose dependent rect. 2 2
969 71.53 precipitation 0.1 720 < th dose independent rect. 19 8
974 71.53 precipitation 0.1 720 < th dose dependent rect. 19 8
984 71.55 wind 1.0 10 < th dose independent rect. 12 15