Os01g0956700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0956700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.07 | 0.319 | 8.92 | 0.348 | 0.295 | -1.46 | -0.209 | 1.59 | 0.11 | 2.88 | 29.13 | 1385 | -- | -- |
| 47.54 | 0.321 | 8.88 | 0.672 | 0.307 | -1.6 | -0.258 | -- | 0.187 | 2.71 | 25.61 | 1410 | -- | -- |
| 46.18 | 0.317 | 8.92 | 0.362 | 0.275 | -1.48 | -- | 1.58 | 0.11 | 3.03 | 28.76 | 1332 | -- | -- |
| 47.75 | 0.322 | 8.88 | 0.678 | 0.309 | -1.63 | -- | -- | 0.187 | 2.79 | 25.49 | 1409 | -- | -- |
| 49.02 | 0.326 | 8.92 | 0.296 | -- | -1.56 | -- | 2.07 | 0.164 | -- | 34.7 | 1174 | -- | -- |
| 83.74 | 0.429 | 8.8 | 1.16 | 0.38 | -- | -0.288 | -- | 0.533 | 2.9 | -- | -- | -- | -- |
| 84.02 | 0.429 | 8.8 | 1.17 | 0.379 | -- | -- | -- | 0.535 | 2.86 | -- | -- | -- | -- |
| 51.26 | 0.333 | 8.89 | 0.689 | -- | -1.67 | -- | -- | 0.174 | -- | 25.91 | 1147 | -- | -- |
| 54.52 | 0.344 | 8.9 | -- | 0.311 | -1.72 | -- | -- | 0.0569 | 2.92 | 23.83 | 3778 | -- | -- |
| 92.3 | 0.449 | 8.8 | 1.18 | -- | -- | -- | -- | 0.545 | -- | -- | -- | -- | -- |
| 119.88 | 0.512 | 8.83 | -- | 0.402 | -- | -- | -- | 0.405 | 2.89 | -- | -- | -- | -- |
| 59.41 | 0.359 | 8.91 | -- | -- | -1.74 | -- | -- | 0.0561 | -- | 24.4 | 3883 | -- | -- |
| 129.2 | 0.531 | 8.83 | -- | -- | -- | -- | -- | 0.414 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 3 | 44.84 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 24 | 44.98 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 36 | 45.02 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 216 | 45.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 417 | 46.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 491 | 46.12 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 542 | 46.19 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 562 | 46.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 563 | 46.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 564 | 46.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 565 | 46.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 656 | 46.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 844 | 46.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 3 |
| 866 | 46.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 986 | 46.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 1 |