Os01g0956300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0956300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.72 | 0.64 | 5.66 | 0.557 | 0.887 | -0.972 | -0.198 | -3.27 | -0.0728 | 11.2 | 17.73 | 3 | -- | -- |
| 192.46 | 0.651 | 5.59 | 1.1 | 0.906 | -1.05 | -0.992 | -- | 0.0792 | 11.4 | 21 | 16 | -- | -- |
| 185.82 | 0.635 | 5.66 | 0.514 | 0.887 | -0.953 | -- | -3.44 | -0.0833 | 11.3 | 17.97 | 3 | -- | -- |
| 196.67 | 0.657 | 5.59 | 1.06 | 0.917 | -1.07 | -- | -- | 0.0784 | 11.4 | 21 | 16 | -- | -- |
| 225.65 | 0.7 | 5.71 | 0.368 | -- | -0.297 | -- | -3.51 | -0.196 | -- | 18.02 | 6 | -- | -- |
| 210.63 | 0.68 | 5.63 | 0.885 | 0.685 | -- | -1.01 | -- | -0.0978 | 10.1 | -- | -- | -- | -- |
| 214.45 | 0.686 | 5.64 | 0.843 | 0.698 | -- | -- | -- | -0.102 | 9.72 | -- | -- | -- | -- |
| 216.83 | 0.686 | 5.56 | 0.98 | -- | -1.15 | -- | -- | 0.216 | -- | 23.14 | 831 | -- | -- |
| 224.44 | 0.702 | 5.63 | -- | 0.823 | -0.725 | -- | -- | -0.0903 | 10.9 | 21 | 16 | -- | -- |
| 243.41 | 0.729 | 5.65 | 0.836 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 233.17 | 0.714 | 5.66 | -- | 0.696 | -- | -- | -- | -0.196 | 9.63 | -- | -- | -- | -- |
| 242.15 | 0.725 | 5.66 | -- | -- | -0.808 | -- | -- | -0.136 | -- | 24.5 | 842 | -- | -- |
| 261.86 | 0.755 | 5.68 | -- | -- | -- | -- | -- | -0.194 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 178.09 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 8 | 182.10 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 9 | 20 |
| 22 | 183.92 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 30 | 184.56 | wind | 5.0 | 30 | < th | dose independent | rect. | 13 | 16 |
| 33 | 184.65 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 40 | 185.35 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 55 | 186.01 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 63 | 186.23 | temperature | 15.0 | 10 | > th | dose dependent | no | NA | NA |
| 71 | 186.44 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 72 | 186.46 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 74 | 186.50 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 79 | 186.68 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 82 | 186.80 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 85 | 186.86 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 15 | 23 |
| 90 | 186.92 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 93 | 186.94 | wind | 5.0 | 30 | < th | dose independent | rect. | 15 | 14 |
| 95 | 186.94 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 107 | 187.00 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 112 | 187.06 | radiation | 20.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 117 | 187.13 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 122 | 187.14 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 123 | 187.14 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 12 |
| 124 | 187.14 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 12 |
| 126 | 187.14 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 134 | 187.15 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 17 |
| 136 | 187.16 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 169 | 187.24 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 210 | 187.29 | radiation | 20.0 | 1440 | < th | dose independent | no | NA | NA |
| 252 | 187.35 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 265 | 187.40 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 281 | 187.43 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 320 | 187.77 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 331 | 187.83 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 332 | 187.83 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 337 | 187.85 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 338 | 187.86 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 373 | 187.96 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 374 | 187.96 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 383 | 188.00 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 386 | 188.01 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 415 | 188.09 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 16 |
| 417 | 188.09 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 424 | 188.11 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 429 | 188.15 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 440 | 188.18 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 447 | 188.20 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 461 | 188.24 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 468 | 188.28 | radiation | 30.0 | 1440 | < th | dose dependent | sin | 0 | NA |
| 477 | 188.31 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 484 | 188.33 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 496 | 188.35 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 20 |
| 508 | 188.37 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 24 | 16 |
| 512 | 188.37 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 518 | 188.38 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 521 | 188.39 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 522 | 188.39 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 526 | 188.40 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 533 | 188.41 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 17 |
| 548 | 188.44 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 554 | 188.45 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 564 | 188.47 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 568 | 188.48 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 589 | 188.50 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 591 | 188.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 659 | 188.59 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 670 | 188.62 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 679 | 188.63 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 717 | 188.67 | radiation | 20.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 719 | 188.67 | radiation | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 840 | 188.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 852 | 188.71 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 876 | 188.74 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 877 | 188.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 888 | 188.76 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 910 | 188.78 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 911 | 188.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 918 | 188.80 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 962 | 188.83 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 963 | 188.84 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |