Os01g0954100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0954100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 220.81 | 0.698 | 3.05 | -0.11 | 0.0711 | 1.2 | -0.161 | -4.99 | 0.108 | 10.1 | 0.7 | 131 | -- | -- |
| 228.84 | 0.705 | 3.02 | -0.0433 | 0.0851 | 0.606 | -0.144 | -- | 0.0994 | 9.61 | 1.2 | 183 | -- | -- |
| 220.85 | 0.692 | 3.05 | -0.116 | 0.0791 | 1.21 | -- | -4.99 | 0.102 | 10.2 | 0.4986 | 126 | -- | -- |
| 228.89 | 0.705 | 3.02 | -0.0314 | 0.0751 | 0.622 | -- | -- | 0.0996 | 10.4 | 1.204 | 183 | -- | -- |
| 221.21 | 0.693 | 3.05 | -0.13 | -- | 1.24 | -- | -5.06 | 0.105 | -- | 0.5 | 126 | -- | -- |
| 232.61 | 0.715 | 3.03 | 0.0533 | 0.162 | -- | -0.318 | -- | 0.0584 | 6.94 | -- | -- | -- | -- |
| 232.87 | 0.715 | 3.03 | 0.0478 | 0.161 | -- | -- | -- | 0.0594 | 7.15 | -- | -- | -- | -- |
| 229.21 | 0.705 | 3.02 | -0.0307 | -- | 0.634 | -- | -- | 0.103 | -- | 1.2 | 185 | -- | -- |
| 228.9 | 0.705 | 3.02 | -- | 0.0723 | 0.618 | -- | -- | 0.105 | 10.8 | 1.2 | 183 | -- | -- |
| 234.23 | 0.715 | 3.03 | 0.0508 | -- | -- | -- | -- | 0.0622 | -- | -- | -- | -- | -- |
| 232.93 | 0.714 | 3.03 | -- | 0.161 | -- | -- | -- | 0.0541 | 7.13 | -- | -- | -- | -- |
| 229.23 | 0.705 | 3.02 | -- | -- | 0.624 | -- | -- | 0.105 | -- | 1.2 | 185 | -- | -- |
| 234.3 | 0.714 | 3.03 | -- | -- | -- | -- | -- | 0.0566 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 206.22 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 4 | 1 |
| 4 | 206.22 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 38 | 217.79 | wind | 1 | 90 | < th | dose independent | rect. | 2 | 1 |
| 46 | 218.21 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 2 | 1 |
| 47 | 218.21 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 69 | 219.07 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 5 |
| 73 | 219.21 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 4 |
| 81 | 219.47 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 23 | 7 |
| 107 | 220.67 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 24 | 7 |
| 119 | 221.23 | wind | 1 | 270 | < th | dose independent | rect. | 20 | 9 |
| 120 | 221.23 | wind | 1 | 270 | < th | dose independent | rect. | 17 | 12 |
| 131 | 221.46 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 8 |
| 160 | 221.78 | wind | 1 | 90 | < th | dose dependent | sin | 13 | NA |
| 171 | 221.91 | wind | 1 | 90 | < th | dose independent | sin | 12 | NA |
| 205 | 222.22 | wind | 1 | 90 | > th | dose independent | sin | 11 | NA |
| 222 | 222.30 | wind | 1 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 247 | 222.41 | wind | 1 | 90 | < th | dose dependent | rect. | 13 | 15 |
| 278 | 222.56 | wind | 1 | 270 | > th | dose independent | sin | 14 | NA |
| 376 | 222.88 | wind | 1 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 414 | 223.07 | wind | 3 | 10 | < th | dose independent | rect. | 13 | 2 |
| 441 | 223.26 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 24 | 1 |
| 481 | 223.35 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 14 |
| 498 | 223.39 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 503 | 223.40 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 13 | 1 |
| 522 | 223.45 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 14 |
| 523 | 223.45 | wind | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 553 | 223.50 | wind | 7 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 557 | 223.51 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 626 | 223.72 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 23 |
| 721 | 224.03 | wind | 1 | 90 | < th | dose dependent | rect. | 21 | 17 |
| 796 | 224.16 | wind | 1 | 90 | < th | dose independent | rect. | 5 | 23 |
| 824 | 224.23 | wind | 1 | 90 | < th | dose dependent | no | NA | NA |
| 845 | 224.26 | wind | 1 | 90 | < th | dose independent | rect. | 17 | 21 |
| 888 | 224.38 | wind | 1 | 90 | > th | dose independent | no | NA | NA |
| 901 | 224.41 | temperature | 25 | 30 | > th | dose dependent | rect. | 23 | 2 |
| 912 | 224.46 | humidity | 60 | 10 | < th | dose independent | rect. | 14 | 1 |
| 915 | 224.47 | wind | 1 | 90 | < th | dose independent | no | NA | NA |
| 953 | 224.63 | radiation | 40 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 959 | 224.66 | wind | 1 | 90 | > th | dose independent | rect. | 14 | 23 |