Os01g0953100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os01g0953100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.12 | 0.388 | 10.7 | 0.863 | 1.46 | 1.31 | -0.39 | -0.546 | 0.161 | 23.2 | 50.12 | 876 | -- | -- |
| 67.94 | 0.384 | 10.7 | 0.864 | 1.46 | 1.14 | -0.36 | -- | 0.133 | 23.2 | 51 | 956 | -- | -- |
| 68.39 | 0.385 | 10.7 | 0.838 | 1.46 | 1.03 | -- | 0.417 | 0.153 | 23.3 | 51.62 | 993 | -- | -- |
| 68.47 | 0.385 | 10.7 | 0.855 | 1.46 | 1.12 | -- | -- | 0.148 | 23.3 | 51.26 | 993 | -- | -- |
| 190.7 | 0.647 | 10.6 | 0.703 | -- | 0.547 | -- | 0.421 | 0.218 | -- | 55.6 | 1413 | -- | -- |
| 81.85 | 0.424 | 10.6 | 0.638 | 1.36 | -- | -0.618 | -- | 0.245 | 23.2 | -- | -- | -- | -- |
| 83.47 | 0.428 | 10.6 | 0.663 | 1.36 | -- | -- | -- | 0.247 | 23.2 | -- | -- | -- | -- |
| 154.58 | 0.582 | 10.6 | 0.761 | -- | 0.643 | -- | -- | 0.267 | -- | 75 | 1563 | -- | -- |
| 86.61 | 0.433 | 10.7 | -- | 1.44 | 0.804 | -- | -- | 0.125 | 23.3 | 51.03 | 878 | -- | -- |
| 198.7 | 0.659 | 10.6 | 0.696 | -- | -- | -- | -- | 0.259 | -- | -- | -- | -- | -- |
| 95.06 | 0.456 | 10.7 | -- | 1.36 | -- | -- | -- | 0.173 | 23.2 | -- | -- | -- | -- |
| 169.26 | 0.608 | 10.6 | -- | -- | 0.615 | -- | -- | 0.153 | -- | 78 | 1590 | -- | -- |
| 211.48 | 0.679 | 10.6 | -- | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.78 | wind | 7 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 2 | 66.88 | wind | 7 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 22 | 67.43 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 6 |
| 25 | 67.45 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 14 |
| 26 | 67.45 | wind | 7 | 14400 | > th | dose dependent | rect. | 11 | 10 |
| 28 | 67.48 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 31 | 67.52 | wind | 7 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 75 | 67.79 | wind | 7 | 14400 | < th | dose independent | sin | 22 | NA |
| 79 | 67.81 | wind | 7 | 14400 | > th | dose independent | sin | 22 | NA |
| 82 | 67.81 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 126 | 68.03 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 2 |
| 131 | 68.06 | wind | 7 | 14400 | > th | dose dependent | sin | 21 | NA |
| 151 | 68.17 | wind | 9 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 212 | 68.39 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 378 | 68.77 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 457 | 68.90 | wind | 5 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 511 | 68.98 | wind | 7 | 14400 | > th | dose independent | rect. | 10 | 20 |
| 525 | 69.01 | wind | 7 | 14400 | < th | dose independent | rect. | 10 | 20 |
| 538 | 69.02 | wind | 7 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 555 | 69.05 | wind | 7 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 562 | 69.06 | wind | 7 | 14400 | > th | dose dependent | rect. | 13 | 23 |
| 572 | 69.09 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 599 | 69.11 | wind | 9 | 14400 | < th | dose independent | rect. | 17 | 22 |
| 615 | 69.13 | wind | 7 | 14400 | > th | dose dependent | no | NA | NA |
| 630 | 69.14 | wind | 7 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 733 | 69.31 | wind | 9 | 14400 | > th | dose independent | rect. | 17 | 22 |
| 737 | 69.32 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 5 |
| 740 | 69.33 | wind | 7 | 14400 | > th | dose independent | no | NA | NA |
| 765 | 69.39 | wind | 7 | 14400 | < th | dose independent | no | NA | NA |
| 778 | 69.41 | humidity | 60 | 1440 | < th | dose dependent | rect. | 15 | 21 |
| 807 | 69.50 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 826 | 69.53 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 843 | 69.57 | wind | 9 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 850 | 69.59 | temperature | 30 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 857 | 69.60 | humidity | 60 | 720 | > th | dose independent | rect. | 15 | 20 |
| 860 | 69.61 | temperature | 30 | 43200 | < th | dose independent | rect. | 7 | 2 |
| 882 | 69.64 | humidity | 80 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 892 | 69.66 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 899 | 69.66 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 921 | 69.71 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 946 | 69.76 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 950 | 69.77 | humidity | 80 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 978 | 69.81 | humidity | 80 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 999 | 69.84 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 1 |