Os01g0952900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0952900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 922.48 | 1.43 | 6.17 | 1.22 | 1.59 | 2.71 | 1.35 | -2.62 | 1.1 | 20.9 | 9.935 | 1344 | 7.95 | 9.7 |
| 919.1 | 1.41 | 6.17 | 1.22 | 1.58 | 2.69 | 1.32 | -- | 1.1 | 20.2 | 16.19 | 1144 | 8.93 | 8.25 |
| 926.82 | 1.42 | 6.17 | 1.22 | 1.59 | 2.7 | -- | -2.61 | 1.1 | 20.3 | 11.4 | 1195 | 8.13 | 9.45 |
| 924.09 | 1.42 | 6.17 | 1.22 | 1.58 | 2.71 | -- | -- | 1.1 | 20.1 | 16.12 | 1139 | 8.93 | 8.31 |
| 981.42 | 1.46 | 6.22 | 1.03 | -- | 3.74 | -- | -1.78 | 0.912 | -- | 10.65 | 960 | 8.57 | 9.47 |
| 1095.73 | 1.55 | 6.31 | 0.781 | 1.65 | -- | 0.882 | -- | 0.465 | 21 | -- | -- | -- | -- |
| 1098.4 | 1.55 | 6.31 | 0.75 | 1.65 | -- | -- | -- | 0.464 | 21 | -- | -- | -- | -- |
| 962.9 | 1.45 | 6.16 | 1 | -- | 3.22 | -- | -- | 0.964 | -- | 22.15 | 987 | 10.8 | 6.67 |
| 958.75 | 1.44 | 6.17 | -- | 1.58 | 2.71 | -- | -- | 1.1 | 20.1 | 10.55 | 1114 | 8.88 | 8.65 |
| 1254.6 | 1.66 | 6.27 | 0.753 | -- | -- | -- | -- | 0.454 | -- | -- | -- | -- | -- |
| 1113.23 | 1.56 | 6.33 | -- | 1.65 | -- | -- | -- | 0.38 | 21.1 | -- | -- | -- | -- |
| 983.34 | 1.46 | 6.19 | -- | -- | 3.59 | -- | -- | 0.823 | -- | 22.22 | 935 | 11.2 | 6.26 |
| 1269.55 | 1.66 | 6.29 | -- | -- | -- | -- | -- | 0.37 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 930.51 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 10 |
| 3 | 932.74 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 5 | 932.98 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 9 | 933.10 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 16 |
| 12 | 933.18 | radiation | 10 | 1440 | < th | dose dependent | rect. | 8 | 19 |
| 27 | 937.06 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 32 | 941.33 | radiation | 10 | 1440 | < th | dose dependent | sin | 22 | NA |
| 34 | 941.94 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 61 | 951.33 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 9 |
| 64 | 952.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 82 | 954.37 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 83 | 954.40 | radiation | 10 | 1440 | > th | dose independent | sin | 1 | NA |
| 85 | 954.59 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 205 | 957.61 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 242 | 958.59 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 356 | 959.67 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 414 | 962.61 | humidity | 70 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 430 | 963.37 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 444 | 963.48 | radiation | 10 | 1440 | < th | dose dependent | rect. | 23 | 19 |
| 445 | 963.49 | radiation | 10 | 1440 | < th | dose dependent | rect. | 20 | 22 |
| 463 | 964.78 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 470 | 964.85 | radiation | 10 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 478 | 964.88 | radiation | 10 | 1440 | < th | dose dependent | rect. | 23 | 22 |
| 499 | 964.97 | radiation | 10 | 1440 | < th | dose dependent | no | NA | NA |
| 503 | 964.98 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 531 | 966.08 | humidity | 90 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 638 | 968.32 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 8 |
| 666 | 968.82 | wind | 5 | 90 | < th | dose independent | rect. | 8 | 21 |
| 682 | 969.38 | wind | 5 | 90 | < th | dose independent | rect. | 15 | 14 |
| 695 | 969.87 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 696 | 969.90 | radiation | 10 | 720 | < th | dose independent | rect. | 12 | 5 |
| 704 | 970.35 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 734 | 971.59 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 741 | 971.65 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 748 | 971.70 | radiation | 10 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 767 | 972.39 | wind | 5 | 90 | > th | dose dependent | sin | 11 | NA |
| 832 | 975.95 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 847 | 976.15 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 920 | 977.37 | radiation | 10 | 720 | < th | dose independent | rect. | 12 | 11 |
| 952 | 977.98 | humidity | 70 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 965 | 978.11 | radiation | 10 | 720 | < th | dose independent | rect. | 14 | 1 |
| 971 | 978.17 | radiation | 10 | 1440 | < th | dose independent | sin | 19 | NA |
| 975 | 978.20 | temperature | 25 | 10 | < th | dose independent | rect. | 12 | 8 |