Os01g0951500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0951500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cytochrome P450 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.24 | 0.346 | 11.5 | 0.632 | 2.56 | -0.571 | 0.463 | 0.841 | -0.234 | 5.87 | 21.1 | 4497 | -- | -- |
| 55.28 | 0.346 | 11.5 | 0.481 | 2.59 | -0.715 | 0.524 | -- | -0.263 | 5.87 | 21.2 | 4493 | -- | -- |
| 54.76 | 0.345 | 11.5 | 0.633 | 2.56 | -0.571 | -- | 0.836 | -0.237 | 5.87 | 21.1 | 4480 | -- | -- |
| 55.76 | 0.348 | 11.5 | 0.46 | 2.57 | -0.679 | -- | -- | -0.276 | 5.86 | 21.1 | 4495 | -- | -- |
| 213.48 | 0.681 | 11.4 | 0.868 | -- | -1.61 | -- | 0.459 | 0.31 | -- | 26.3 | 397 | -- | -- |
| 65.18 | 0.378 | 11.5 | 0.0305 | 2.55 | -- | 0.517 | -- | -0.495 | 5.89 | -- | -- | -- | -- |
| 65.83 | 0.38 | 11.5 | 0.0343 | 2.55 | -- | -- | -- | -0.497 | 5.88 | -- | -- | -- | -- |
| 207 | 0.67 | 11.5 | 0.586 | -- | -1.78 | -- | -- | 0.0806 | -- | 26.23 | 394 | -- | -- |
| 58.45 | 0.356 | 11.5 | -- | 2.58 | -0.426 | -- | -- | -0.355 | 5.84 | 22.58 | 2929 | -- | -- |
| 404.23 | 0.939 | 11.6 | 0.112 | -- | -- | -- | -- | -0.438 | -- | -- | -- | -- | -- |
| 65.87 | 0.38 | 11.5 | -- | 2.56 | -- | -- | -- | -0.501 | 5.87 | -- | -- | -- | -- |
| 215.79 | 0.684 | 11.5 | -- | -- | -1.71 | -- | -- | -0.00138 | -- | 26.24 | 392 | -- | -- |
| 404.56 | 0.939 | 11.6 | -- | -- | -- | -- | -- | -0.45 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.00 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 11 |
| 2 | 48.56 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 12 |
| 8 | 49.85 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 11 | 50.27 | temperature | 20 | 90 | > th | dose independent | rect. | 14 | 20 |
| 12 | 50.30 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 22 |
| 18 | 50.57 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 12 |
| 21 | 50.61 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 14 |
| 24 | 50.72 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 13 |
| 49 | 51.03 | temperature | 25 | 90 | < th | dose dependent | sin | 14 | NA |
| 56 | 51.09 | temperature | 25 | 270 | < th | dose dependent | sin | 16 | NA |
| 86 | 51.35 | temperature | 25 | 10 | < th | dose dependent | sin | 13 | NA |
| 91 | 51.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 127 | 51.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 12 |
| 136 | 51.80 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 16 |
| 154 | 51.92 | temperature | 15 | 30 | > th | dose dependent | sin | 11 | NA |
| 162 | 51.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 200 | 52.17 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 12 |
| 202 | 52.18 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 205 | 52.20 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 4 |
| 255 | 52.41 | temperature | 15 | 90 | > th | dose dependent | rect. | 15 | 19 |
| 265 | 52.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 3 |
| 273 | 52.50 | radiation | 1 | 720 | < th | dose dependent | sin | 13 | NA |
| 276 | 52.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 300 | 52.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 19 |
| 310 | 52.64 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 1 |
| 343 | 52.72 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 385 | 52.84 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 391 | 52.86 | temperature | 25 | 90 | < th | dose dependent | rect. | 16 | 19 |
| 403 | 52.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 18 |
| 429 | 53.02 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 442 | 53.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 12 |
| 445 | 53.06 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 525 | 53.25 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 13 |
| 544 | 53.30 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 565 | 53.34 | temperature | 20 | 30 | < th | dose independent | rect. | 17 | 13 |
| 567 | 53.35 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 12 |
| 577 | 53.37 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 582 | 53.38 | humidity | 60 | 43200 | < th | dose dependent | rect. | 22 | 11 |
| 656 | 53.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 672 | 53.54 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 680 | 53.55 | humidity | 50 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 698 | 53.58 | temperature | 20 | 90 | < th | dose independent | sin | 13 | NA |
| 699 | 53.58 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 705 | 53.59 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 716 | 53.59 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 16 |
| 718 | 53.60 | humidity | 50 | 43200 | > th | dose independent | rect. | 23 | 11 |
| 722 | 53.60 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 770 | 53.66 | humidity | 50 | 43200 | > th | dose independent | rect. | 21 | 13 |
| 801 | 53.69 | temperature | 15 | 10 | > th | dose dependent | rect. | 22 | 12 |
| 821 | 53.72 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 872 | 53.78 | humidity | 50 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 889 | 53.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 902 | 53.81 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 5 |
| 936 | 53.85 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 956 | 53.87 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 957 | 53.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 7 |