Os01g0950000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione S-transferase GST 28 (EC 2.5.1.18) (Fragment).
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Os01g0950000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione S-transferase GST 28 (EC 2.5.1.18) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.34 | 0.576 | 3.04 | 0.248 | 0.456 | -0.0041 | 0.601 | 2.34 | -0.146 | 23.3 | 65.21 | 4751 | -- | -- |
| 158.24 | 0.586 | 3.04 | 0.192 | 0.447 | 0.177 | 0.586 | -- | -0.147 | 23.3 | 73 | 5391 | -- | -- |
| 151.8 | 0.574 | 3.04 | 0.228 | 0.455 | -0.026 | -- | 2.42 | -0.145 | 23.3 | 65.1 | 4670 | -- | -- |
| 159.86 | 0.589 | 3.05 | 0.175 | 0.458 | 0.165 | -- | -- | -0.162 | 23.2 | 70.1 | 5334 | -- | -- |
| 164.7 | 0.598 | 3.03 | 0.232 | -- | 0.00266 | -- | 2.19 | -0.147 | -- | 65.37 | 4733 | -- | -- |
| 158.69 | 0.591 | 3.05 | 0.203 | 0.435 | -- | 0.615 | -- | -0.182 | 23.3 | -- | -- | -- | -- |
| 160.31 | 0.593 | 3.05 | 0.178 | 0.433 | -- | -- | -- | -0.184 | 23.2 | -- | -- | -- | -- |
| 169.46 | 0.609 | 3.04 | 0.202 | -- | 0.16 | -- | -- | -0.182 | -- | 72.11 | 5983 | -- | -- |
| 160.69 | 0.59 | 3.05 | -- | 0.464 | 0.177 | -- | -- | -0.162 | 23.2 | 70.11 | 5334 | -- | -- |
| 172.03 | 0.613 | 3.04 | 0.188 | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
| 161.14 | 0.594 | 3.06 | -- | 0.435 | -- | -- | -- | -0.204 | 23.2 | -- | -- | -- | -- |
| 170.53 | 0.61 | 3.05 | -- | -- | 0.156 | -- | -- | -0.204 | -- | 72.11 | 5983 | -- | -- |
| 172.96 | 0.614 | 3.05 | -- | -- | -- | -- | -- | -0.201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 140.69 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 3 | 141.09 | humidity | 80.0 | 90 | < th | dose independent | rect. | 2 | 2 |
| 4 | 141.11 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 2 | 2 |
| 7 | 141.39 | humidity | 90.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 25 | 147.03 | wind | 3.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 27 | 147.92 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 31 | 148.39 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 35 | 148.79 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 4 |
| 38 | 148.83 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 1 |
| 54 | 149.58 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 10 |
| 59 | 149.69 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 13 |
| 74 | 150.26 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 76 | 150.36 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 3 |
| 83 | 150.42 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 3 |
| 87 | 150.45 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 24 | 4 |
| 90 | 150.52 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 91 | 150.53 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 104 | 150.65 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 118 | 150.75 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 1 | 13 |
| 124 | 150.76 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 131 | 150.84 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 143 | 150.90 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 153 | 150.97 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 173 | 151.00 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 179 | 151.00 | radiation | 40.0 | 720 | < th | dose independent | rect. | 12 | 11 |
| 211 | 151.03 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 18 | 19 |
| 241 | 151.11 | humidity | 60.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 299 | 151.18 | humidity | 70.0 | 4320 | < th | dose dependent | sin | 2 | NA |
| 300 | 151.18 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 9 | 4 |
| 304 | 151.19 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 10 |
| 314 | 151.20 | wind | 1.0 | 30 | < th | dose dependent | rect. | 5 | 20 |
| 344 | 151.21 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 16 | 22 |
| 457 | 151.27 | humidity | 70.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 540 | 151.30 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 6 | 7 |
| 586 | 151.32 | humidity | 70.0 | 4320 | < th | dose dependent | no | NA | NA |
| 649 | 151.33 | radiation | 40.0 | 720 | < th | dose independent | rect. | 12 | 9 |
| 673 | 151.34 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 700 | 151.36 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 713 | 151.37 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 9 | 16 |
| 725 | 151.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 748 | 151.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 24 | 17 |
| 800 | 151.42 | humidity | 60.0 | 4320 | > th | dose independent | no | NA | NA |
| 803 | 151.42 | wind | 3.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 904 | 151.43 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 927 | 151.43 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 972 | 151.46 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 17 | 1 |