Os01g0949900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, N-terminal domain containing protein.
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Os01g0949900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 359.14 | 0.89 | 6.64 | -2.07 | 1.72 | 1.2 | 0.452 | 12 | -0.863 | 20.5 | 23.83 | 4320 | 17.4 | 4.75 |
| 393.51 | 0.924 | 6.99 | -1.5 | 1.67 | 1.96 | 0.229 | -- | -0.962 | 19.9 | 4.498 | 15839 | 15.7 | 5.4 |
| 359.49 | 0.883 | 6.64 | -2.09 | 1.7 | 1.22 | -- | 12 | -0.866 | 20.5 | 22.42 | 4320 | 17.4 | 6.51 |
| 375.07 | 0.902 | 6.99 | -1.63 | 1.61 | 2.03 | -- | -- | -0.785 | 20.6 | 3.381 | 15848 | 17.3 | 5.78 |
| 483.31 | 1.02 | 6.64 | -2.93 | -- | 2.82 | -- | 11.6 | -1.02 | -- | 58.86 | 4323 | 17.4 | 7.16 |
| 560.88 | 1.11 | 7.13 | -1.11 | 1.74 | -- | 0.299 | -- | -1.26 | 20.1 | -- | -- | -- | -- |
| 561.15 | 1.11 | 7.13 | -1.12 | 1.74 | -- | -- | -- | -1.26 | 20.2 | -- | -- | -- | -- |
| 480.06 | 1.02 | 6.95 | -1.39 | -- | 2.41 | -- | -- | -0.828 | -- | 3.511 | 20344 | 17.5 | 6.74 |
| 380.24 | 0.908 | 6.94 | -- | 1.77 | 2.19 | -- | -- | -0.375 | 20.1 | 0.67 | 47520 | 18.1 | 4.47 |
| 727.8 | 1.26 | 7.08 | -1.13 | -- | -- | -- | -- | -1.28 | -- | -- | -- | -- | -- |
| 594.09 | 1.14 | 7.1 | -- | 1.75 | -- | -- | -- | -1.14 | 20.1 | -- | -- | -- | -- |
| 520.31 | 1.06 | 6.95 | -- | -- | 2.79 | -- | -- | -0.416 | -- | 2.056 | 20398 | 17.5 | 6.85 |
| 761.62 | 1.29 | 7.06 | -- | -- | -- | -- | -- | -1.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 354.20 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 2 | 356.92 | temperature | 20 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 6 | 357.46 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 9 |
| 15 | 357.79 | radiation | 1 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 16 | 357.80 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 18 | 357.81 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 20 | 357.83 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 26 | 357.89 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 32 | 358.11 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 45 | 358.37 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 56 | 359.00 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 65 | 359.42 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 71 | 359.68 | temperature | 20 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 72 | 359.69 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 4 |
| 73 | 359.79 | temperature | 20 | 43200 | > th | dose independent | sin | 20 | NA |
| 76 | 359.86 | temperature | 20 | 43200 | < th | dose independent | rect. | 12 | 10 |
| 80 | 359.98 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 81 | 360.00 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 85 | 360.09 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 95 | 360.31 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 101 | 360.49 | humidity | 90 | 43200 | > th | dose dependent | sin | 21 | NA |
| 102 | 360.49 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 130 | 361.02 | temperature | 25 | 43200 | < th | dose dependent | rect. | 10 | 3 |
| 133 | 361.06 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 140 | 361.15 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 6 |
| 141 | 361.19 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 6 |
| 143 | 361.20 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 147 | 361.24 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 162 | 361.41 | temperature | 20 | 43200 | < th | dose independent | sin | 20 | NA |
| 167 | 361.49 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 11 |
| 168 | 361.50 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 211 | 362.06 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 241 | 362.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 9 |
| 265 | 362.70 | temperature | 20 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 290 | 362.99 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 14 |
| 299 | 363.09 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 307 | 363.14 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 321 | 363.29 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 17 |
| 329 | 363.40 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 6 |
| 364 | 363.75 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 366 | 363.79 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 395 | 363.92 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 11 |
| 398 | 363.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 2 | 17 |
| 449 | 364.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 484 | 364.74 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 488 | 364.78 | radiation | 40 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 519 | 364.94 | radiation | 20 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 534 | 365.00 | radiation | 20 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 537 | 365.02 | radiation | 20 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 573 | 365.14 | humidity | 90 | 43200 | > th | dose independent | sin | 0 | NA |
| 625 | 365.44 | humidity | 90 | 43200 | < th | dose independent | rect. | 16 | 3 |
| 631 | 365.47 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 737 | 366.16 | temperature | 20 | 43200 | > th | dose independent | no | NA | NA |
| 764 | 366.31 | temperature | 20 | 43200 | > th | dose independent | rect. | 14 | 23 |
| 774 | 366.34 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 786 | 366.41 | radiation | 1 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 787 | 366.42 | wind | 5 | 43200 | > th | dose independent | sin | 4 | NA |
| 788 | 366.42 | temperature | 20 | 43200 | > th | dose independent | rect. | 12 | 23 |
| 810 | 366.52 | temperature | 20 | 43200 | < th | dose independent | no | NA | NA |
| 837 | 366.64 | temperature | 20 | 43200 | < th | dose independent | rect. | 14 | 23 |
| 838 | 366.64 | temperature | 20 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 839 | 366.64 | temperature | 25 | 43200 | < th | dose dependent | sin | 22 | NA |
| 851 | 366.69 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 8 |
| 868 | 366.76 | temperature | 20 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 876 | 366.79 | wind | 5 | 43200 | < th | dose independent | sin | 5 | NA |
| 914 | 366.96 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 986 | 367.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 9 |