Os01g0949700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, N-terminal domain containing protein.
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Os01g0949700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 158.75 | 0.592 | 8.63 | 0.706 | 1.69 | -0.957 | 0.488 | 1.07 | 0.29 | 11.1 | 70 | 11 | -- | -- |
| 161.68 | 0.592 | 8.64 | 0.745 | 1.67 | -0.943 | -0.112 | -- | 0.276 | 11 | 70 | 11 | -- | -- |
| 159.45 | 0.588 | 8.63 | 0.731 | 1.68 | -0.99 | -- | 0.917 | 0.296 | 11 | 70 | 16 | -- | -- |
| 161.62 | 0.592 | 8.63 | 0.766 | 1.69 | -0.923 | -- | -- | 0.299 | 11.1 | 70 | 16 | -- | -- |
| 280.66 | 0.785 | 8.68 | 0.734 | -- | -1.93 | -- | 0.843 | 0.238 | -- | 65.51 | 3 | -- | -- |
| 182.3 | 0.633 | 8.61 | 0.763 | 2.23 | -- | 0.0761 | -- | 0.398 | 12.1 | -- | -- | -- | -- |
| 182.32 | 0.632 | 8.61 | 0.766 | 2.23 | -- | -- | -- | 0.398 | 12.1 | -- | -- | -- | -- |
| 282.63 | 0.783 | 8.68 | 0.771 | -- | -1.91 | -- | -- | 0.253 | -- | 65.31 | 2 | -- | -- |
| 177.16 | 0.62 | 8.65 | -- | 1.68 | -0.929 | -- | -- | 0.232 | 11 | 69 | 22 | -- | -- |
| 494 | 1.04 | 8.66 | 0.696 | -- | -- | -- | -- | 0.366 | -- | -- | -- | -- | -- |
| 197.81 | 0.658 | 8.63 | -- | 2.21 | -- | -- | -- | 0.313 | 12.1 | -- | -- | -- | -- |
| 298.28 | 0.804 | 8.7 | -- | -- | -1.9 | -- | -- | 0.167 | -- | 65.51 | 2 | -- | -- |
| 506.77 | 1.05 | 8.67 | -- | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.71 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 2 | 145.71 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 17 | 148.21 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 18 | 148.26 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 36 | 149.55 | radiation | 1 | 720 | < th | dose dependent | rect. | 23 | 18 |
| 47 | 150.12 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 56 | 150.51 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 57 | 150.51 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 90 | 152.05 | radiation | 1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 91 | 152.08 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 109 | 153.04 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 131 | 154.58 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 132 | 154.69 | radiation | 1 | 720 | < th | dose independent | rect. | 24 | 17 |
| 140 | 155.06 | humidity | 80 | 720 | < th | dose independent | rect. | 11 | 4 |
| 158 | 156.19 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 162 | 156.29 | humidity | 70 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 174 | 156.83 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 179 | 156.96 | radiation | 1 | 720 | > th | dose independent | rect. | 5 | 11 |
| 206 | 157.54 | radiation | 1 | 720 | < th | dose dependent | sin | 2 | NA |
| 243 | 158.09 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 248 | 158.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 15 |
| 249 | 158.12 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 250 | 158.13 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 254 | 158.14 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 259 | 158.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 260 | 158.17 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 275 | 158.30 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 318 | 158.74 | humidity | 70 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 322 | 158.77 | humidity | 70 | 10 | > th | dose dependent | no | NA | NA |
| 326 | 158.83 | humidity | 70 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 334 | 158.96 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 335 | 158.96 | humidity | 70 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 338 | 158.99 | humidity | 70 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 339 | 158.99 | humidity | 70 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 340 | 159.00 | radiation | 1 | 1440 | < th | dose dependent | sin | 21 | NA |
| 362 | 159.33 | humidity | 80 | 720 | > th | dose independent | rect. | 24 | 16 |
| 368 | 159.40 | radiation | 1 | 720 | > th | dose independent | rect. | 12 | 19 |
| 369 | 159.43 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 374 | 159.50 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 379 | 159.56 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 382 | 159.58 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 385 | 159.61 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 386 | 159.61 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 2 | 9 |
| 396 | 159.65 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 23 | 15 |
| 399 | 159.68 | humidity | 80 | 270 | < th | dose independent | rect. | 19 | 22 |
| 410 | 159.71 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 413 | 159.71 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 420 | 159.74 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 422 | 159.74 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 6 | NA |
| 446 | 159.82 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 460 | 159.86 | humidity | 70 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 470 | 159.91 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 12 |
| 472 | 159.91 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 481 | 159.95 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 482 | 159.95 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 506 | 160.00 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 510 | 160.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 526 | 160.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 15 |
| 527 | 160.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 17 |
| 535 | 160.08 | humidity | 70 | 270 | > th | dose dependent | rect. | 22 | 22 |
| 558 | 160.14 | radiation | 1 | 30 | > th | dose independent | rect. | 5 | 13 |
| 574 | 160.16 | radiation | 40 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 575 | 160.16 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 588 | 160.20 | humidity | 80 | 30 | < th | dose independent | rect. | 1 | 17 |
| 591 | 160.20 | humidity | 80 | 270 | > th | dose independent | rect. | 23 | 21 |
| 594 | 160.21 | radiation | 10 | 90 | < th | dose dependent | rect. | 6 | 23 |
| 607 | 160.30 | radiation | 1 | 30 | < th | dose dependent | sin | 0 | NA |
| 639 | 160.37 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 644 | 160.38 | humidity | 80 | 30 | < th | dose independent | rect. | 20 | 22 |
| 734 | 160.56 | humidity | 80 | 720 | > th | dose independent | rect. | 9 | 6 |
| 755 | 160.70 | radiation | 1 | 1440 | < th | dose independent | sin | 21 | NA |
| 759 | 160.71 | radiation | 1 | 1440 | > th | dose independent | sin | 21 | NA |
| 763 | 160.72 | radiation | 1 | 30 | < th | dose independent | rect. | 7 | 23 |
| 765 | 160.73 | humidity | 90 | 30 | < th | dose dependent | rect. | 20 | 22 |
| 783 | 160.82 | radiation | 1 | 720 | < th | dose independent | sin | 0 | NA |
| 789 | 160.84 | humidity | 70 | 90 | > th | dose dependent | rect. | 11 | 18 |
| 821 | 160.90 | radiation | 1 | 30 | > th | dose independent | sin | 0 | NA |
| 832 | 160.91 | radiation | 1 | 30 | > th | dose independent | no | NA | NA |
| 833 | 160.91 | radiation | 1 | 30 | < th | dose independent | no | NA | NA |
| 873 | 160.91 | radiation | 1 | 30 | < th | dose independent | rect. | 11 | 21 |
| 898 | 160.91 | radiation | 1 | 30 | < th | dose independent | rect. | 13 | 23 |
| 899 | 160.91 | radiation | 1 | 30 | < th | dose independent | rect. | 15 | 23 |
| 931 | 160.98 | humidity | 70 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 936 | 161.01 | radiation | 1 | 30 | < th | dose independent | sin | 0 | NA |
| 943 | 161.04 | humidity | 80 | 270 | > th | dose independent | rect. | 7 | 12 |
| 967 | 161.11 | radiation | 1 | 30 | < th | dose independent | rect. | 17 | 23 |
| 970 | 161.12 | radiation | 1 | 30 | < th | dose independent | rect. | 13 | 19 |
| 991 | 161.17 | humidity | 90 | 30 | < th | dose dependent | rect. | 23 | 19 |