Os01g0949300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : EF-Hand type domain containing protein.
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Os01g0949300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : EF-Hand type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.27 | 0.515 | 13 | 0.969 | 1.25 | -1.27 | 0.312 | 0.146 | 0.291 | 21.5 | 149.8 | 1049 | -- | -- |
| 120.26 | 0.511 | 13 | 0.958 | 1.28 | -1.28 | 0.359 | -- | 0.288 | 21.4 | 180.3 | 1028 | -- | -- |
| 120.53 | 0.511 | 13 | 0.975 | 1.27 | -1.3 | -- | 0.393 | 0.294 | 21.5 | 234.1 | 1034 | -- | -- |
| 120.72 | 0.512 | 13 | 0.944 | 1.26 | -1.27 | -- | -- | 0.287 | 21.5 | 256.7 | 1037 | -- | -- |
| 174.2 | 0.615 | 13 | 0.979 | -- | -0.931 | -- | 0.43 | 0.294 | -- | 240.6 | 1438 | -- | -- |
| 142.94 | 0.56 | 13 | 0.886 | 0.95 | -- | 0.288 | -- | 0.255 | 20.8 | -- | -- | -- | -- |
| 143.21 | 0.56 | 13 | 0.876 | 0.949 | -- | -- | -- | 0.255 | 20.8 | -- | -- | -- | -- |
| 174.03 | 0.614 | 13 | 0.973 | -- | -0.914 | -- | -- | 0.259 | -- | 89.26 | 1445 | -- | -- |
| 144.07 | 0.559 | 13.1 | -- | 1.25 | -1.17 | -- | -- | 0.179 | 21.5 | 261.1 | 1026 | -- | -- |
| 194.44 | 0.652 | 13 | 0.875 | -- | -- | -- | -- | 0.248 | -- | -- | -- | -- | -- |
| 163.43 | 0.598 | 13 | -- | 0.947 | -- | -- | -- | 0.157 | 20.9 | -- | -- | -- | -- |
| 197.15 | 0.654 | 13 | -- | -- | -0.831 | -- | -- | 0.179 | -- | 135.5 | 1457 | -- | -- |
| 214.64 | 0.684 | 13 | -- | -- | -- | -- | -- | 0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.67 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 2 | 114.26 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 48 | 116.75 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 56 | 116.92 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 75 | 117.42 | humidity | 70 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 194 | 119.89 | humidity | 60 | 720 | > th | dose dependent | rect. | 11 | 19 |
| 209 | 120.29 | humidity | 70 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 222 | 120.41 | humidity | 70 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 224 | 120.43 | humidity | 70 | 720 | > th | dose dependent | rect. | 10 | 13 |
| 241 | 120.56 | humidity | 60 | 720 | > th | dose dependent | sin | 17 | NA |
| 258 | 120.71 | humidity | 70 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 301 | 121.02 | humidity | 90 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 306 | 121.04 | humidity | 50 | 1440 | > th | dose dependent | rect. | 1 | 15 |
| 359 | 121.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 386 | 121.39 | humidity | 90 | 1440 | < th | dose dependent | rect. | 1 | 15 |
| 394 | 121.42 | humidity | 60 | 1440 | > th | dose dependent | sin | 1 | NA |
| 435 | 121.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 457 | 121.63 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 14 |
| 464 | 121.65 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 465 | 121.65 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 527 | 121.81 | humidity | 80 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 569 | 121.93 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 10 |
| 585 | 121.93 | humidity | 90 | 1440 | < th | dose dependent | sin | 2 | NA |
| 592 | 121.94 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 626 | 122.01 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 647 | 122.07 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 686 | 122.14 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 695 | 122.17 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 701 | 122.18 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 719 | 122.21 | humidity | 80 | 30 | > th | dose dependent | sin | 22 | NA |
| 745 | 122.26 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 748 | 122.26 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 749 | 122.26 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 754 | 122.27 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 844 | 122.42 | radiation | 10 | 1440 | > th | dose independent | sin | 1 | NA |
| 855 | 122.44 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 872 | 122.46 | humidity | 90 | 1440 | < th | dose dependent | rect. | 18 | 22 |
| 892 | 122.48 | humidity | 70 | 90 | > th | dose dependent | rect. | 17 | 23 |