Os01g0948400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0948400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C reductase).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.58 | 0.247 | 10.2 | -0.136 | 1.25 | 0.552 | 0.26 | -0.067 | -0.172 | 16 | 24.12 | 16 | -- | -- |
| 27.58 | 0.245 | 10.2 | -0.141 | 1.25 | 0.559 | 0.281 | -- | -0.174 | 16.1 | 24.1 | 16 | -- | -- |
| 27.74 | 0.245 | 10.2 | -0.115 | 1.25 | 0.545 | -- | -0.201 | -0.168 | 16 | 24.11 | 16 | -- | -- |
| 27.8 | 0.246 | 10.2 | -0.14 | 1.25 | 0.563 | -- | -- | -0.172 | 16 | 24.1 | 16 | -- | -- |
| 106.75 | 0.484 | 10.2 | -0.339 | -- | -3.36 | -- | -8.35 | -0.284 | -- | 17 | 15 | -- | -- |
| 31.99 | 0.265 | 10.2 | -0.272 | 1.18 | -- | 0.317 | -- | -0.266 | 16.3 | -- | -- | -- | -- |
| 32.27 | 0.266 | 10.2 | -0.269 | 1.19 | -- | -- | -- | -0.264 | 16.2 | -- | -- | -- | -- |
| 93.15 | 0.45 | 10.3 | -0.52 | -- | -1.02 | -- | -- | -0.425 | -- | 35.23 | 174 | -- | -- |
| 28.28 | 0.248 | 10.2 | -- | 1.26 | 0.614 | -- | -- | -0.148 | 16 | 24.1 | 15 | -- | -- |
| 108.13 | 0.486 | 10.2 | -0.316 | -- | -- | -- | -- | -0.296 | -- | -- | -- | -- | -- |
| 34.18 | 0.273 | 10.2 | -- | 1.19 | -- | -- | -- | -0.234 | 16.2 | -- | -- | -- | -- |
| 99.73 | 0.465 | 10.2 | -- | -- | -0.843 | -- | -- | -0.352 | -- | 42.98 | 159 | -- | -- |
| 110.77 | 0.491 | 10.2 | -- | -- | -- | -- | -- | -0.261 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 8 | 26.35 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 31 | 26.78 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 37 | 26.84 | temperature | 20 | 90 | > th | dose independent | rect. | 16 | 16 |
| 45 | 26.91 | temperature | 15 | 720 | > th | dose dependent | sin | 15 | NA |
| 54 | 26.96 | temperature | 20 | 270 | > th | dose independent | rect. | 14 | 18 |
| 56 | 26.97 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 19 |
| 66 | 27.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 20 |
| 74 | 27.03 | temperature | 15 | 10 | > th | dose dependent | sin | 10 | NA |
| 78 | 27.04 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 17 |
| 165 | 27.23 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 2 | 17 |
| 181 | 27.27 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 18 |
| 188 | 27.29 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 220 | 27.34 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 232 | 27.36 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 18 |
| 247 | 27.39 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 16 |
| 275 | 27.44 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 4 | 18 |
| 302 | 27.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 7 |
| 333 | 27.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 4 |
| 373 | 27.52 | wind | 5 | 14400 | < th | dose independent | rect. | 9 | 7 |
| 392 | 27.54 | wind | 5 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 402 | 27.54 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 480 | 27.62 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 488 | 27.63 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 489 | 27.63 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 502 | 27.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 503 | 27.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 504 | 27.63 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 505 | 27.64 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 518 | 27.64 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 529 | 27.66 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 13 |
| 549 | 27.67 | wind | 3 | 90 | < th | dose dependent | rect. | 3 | 9 |
| 554 | 27.67 | temperature | 25 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 559 | 27.68 | radiation | 40 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 584 | 27.70 | temperature | 25 | 10 | < th | dose dependent | sin | 7 | NA |
| 620 | 27.72 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 649 | 27.73 | wind | 5 | 14400 | > th | dose independent | rect. | 5 | 12 |
| 654 | 27.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 5 |
| 669 | 27.73 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 679 | 27.74 | wind | 3 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 697 | 27.75 | wind | 5 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 710 | 27.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 715 | 27.76 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 763 | 27.79 | radiation | 30 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 765 | 27.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 12 |
| 773 | 27.80 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 9 |
| 794 | 27.81 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 795 | 27.81 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 863 | 27.83 | wind | 5 | 14400 | > th | dose independent | rect. | 24 | 17 |
| 864 | 27.83 | wind | 5 | 14400 | < th | dose independent | rect. | 24 | 17 |
| 895 | 27.84 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 15 | 15 |