Os01g0947000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3-glucanase precursor.
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Os01g0947000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3-glucanase precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.59 | 0.288 | 2.94 | 0.0373 | 0.0319 | 0.465 | 0.268 | 0.92 | 0.0284 | 9.58 | 43.31 | 7 | -- | -- |
| 38.19 | 0.288 | 2.94 | 0.0348 | 0.0236 | 0.355 | 0.406 | -- | 0.0261 | 10.7 | 42.15 | 10 | -- | -- |
| 37.71 | 0.286 | 2.94 | 0.045 | 0.0578 | 0.492 | -- | 1.09 | 0.0271 | 5.81 | 42.89 | 6 | -- | -- |
| 38.72 | 0.29 | 2.94 | 0.0491 | 0.0534 | 0.379 | -- | -- | 0.0264 | 5.68 | 40.78 | 5 | -- | -- |
| 37.88 | 0.287 | 2.95 | 0.044 | -- | 0.486 | -- | 1.09 | 0.0282 | -- | 42.89 | 6 | -- | -- |
| 39.64 | 0.295 | 2.94 | 0.0283 | 0.0788 | -- | 0.377 | -- | 0.0242 | 10.4 | -- | -- | -- | -- |
| 40.19 | 0.297 | 2.94 | 0.0425 | 0.0813 | -- | -- | -- | 0.0246 | 9.38 | -- | -- | -- | -- |
| 38.84 | 0.29 | 2.94 | 0.0545 | -- | 0.348 | -- | -- | 0.0328 | -- | 39.4 | 10 | -- | -- |
| 38.73 | 0.29 | 2.94 | -- | 0.0569 | 0.366 | -- | -- | 0.026 | 5.95 | 40.83 | 12 | -- | -- |
| 40.58 | 0.298 | 2.94 | 0.042 | -- | -- | -- | -- | 0.0249 | -- | -- | -- | -- | -- |
| 40.24 | 0.297 | 2.94 | -- | 0.0813 | -- | -- | -- | 0.0199 | 9.34 | -- | -- | -- | -- |
| 38.89 | 0.29 | 2.94 | -- | -- | 0.35 | -- | -- | 0.0262 | -- | 39.39 | 12 | -- | -- |
| 40.63 | 0.298 | 2.94 | -- | -- | -- | -- | -- | 0.0203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.26 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 2 | 37.54 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 103 | 37.68 | radiation | 40.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 156 | 37.76 | radiation | 40.0 | 10 | > th | dose dependent | no | NA | NA |
| 331 | 37.77 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 337 | 37.80 | wind | 5.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 367 | 37.86 | radiation | 40.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 369 | 37.87 | radiation | 40.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 589 | 37.92 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 678 | 37.97 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 708 | 38.02 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 713 | 38.02 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 731 | 38.03 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 857 | 38.05 | radiation | 40.0 | 10 | < th | dose independent | sin | 0 | NA |
| 858 | 38.05 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 861 | 38.05 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 912 | 38.06 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 913 | 38.06 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 916 | 38.06 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 920 | 38.06 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 930 | 38.06 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 931 | 38.06 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 951 | 38.06 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 954 | 38.06 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 964 | 38.07 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 965 | 38.07 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 967 | 38.07 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 988 | 38.08 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 991 | 38.08 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 996 | 38.08 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 11 | 1 |
| 998 | 38.08 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |