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Os01g0946700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3- endoglucanase GV).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.64 | 0.577 | 2.78 | -0.172 | 0.214 | 3.12 | -1.28 | 5.57 | -0.0218 | 5.12 | 3 | 1 | 8 | 1 |
| 155.06 | 0.58 | 2.78 | -0.18 | 0.205 | 3.16 | -1.26 | -- | -0.0173 | 4.92 | 4.8 | 2 | 7.78 | 0.955 |
| 155.82 | 0.581 | 2.77 | -0.183 | 0.201 | 2.87 | -- | 5.91 | -0.0109 | 5.92 | 3.7 | 3 | 7.87 | 1.78 |
| 158.16 | 0.586 | 2.77 | -0.178 | 0.203 | 2.96 | -- | -- | -0.00885 | 6.08 | 3.755 | 3 | 7.87 | 1.78 |
| 157.75 | 0.585 | 2.78 | -0.171 | -- | 2.97 | -- | 4.84 | -0.00143 | -- | 3.89 | 3 | 7.87 | 1.78 |
| 173.8 | 0.618 | 2.78 | -0.178 | 0.261 | -- | -1.19 | -- | -0.0382 | 5.31 | -- | -- | -- | -- |
| 176.91 | 0.623 | 2.78 | -0.178 | 0.269 | -- | -- | -- | -0.032 | 6.48 | -- | -- | -- | -- |
| 160.25 | 0.59 | 2.78 | -0.175 | -- | 3.07 | -- | -- | -0.00319 | -- | 3.825 | 3 | 7.87 | 1.79 |
| 159.02 | 0.587 | 2.77 | -- | 0.2 | 2.96 | -- | -- | 0.0112 | 6.12 | 3.838 | 3 | 7.86 | 1.79 |
| 180.68 | 0.628 | 2.78 | -0.171 | -- | -- | -- | -- | -0.0264 | -- | -- | -- | -- | -- |
| 177.75 | 0.624 | 2.77 | -- | 0.267 | -- | -- | -- | -0.0123 | 6.52 | -- | -- | -- | -- |
| 161.06 | 0.591 | 2.77 | -- | -- | 3.07 | -- | -- | 0.0163 | -- | 3.935 | 3 | 7.86 | 1.82 |
| 181.45 | 0.629 | 2.78 | -- | -- | -- | -- | -- | -0.00747 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.64 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 3 | 150.64 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 5 | 153.44 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 7 | 12 |
| 7 | 153.56 | wind | 3.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 8 | 153.69 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 7 | 11 |
| 11 | 154.01 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 2 |
| 15 | 154.04 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 18 | 154.09 | temperature | 20.0 | 10 | < th | dose independent | rect. | 7 | 12 |
| 21 | 154.18 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 4 |
| 27 | 154.24 | temperature | 20.0 | 90 | < th | dose independent | rect. | 7 | 11 |
| 118 | 155.04 | wind | 5.0 | 10 | > th | dose independent | rect. | 2 | 7 |
| 154 | 155.86 | wind | 3.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 160 | 156.57 | wind | 3.0 | 10 | > th | dose dependent | rect. | 2 | 7 |
| 191 | 159.31 | radiation | 10.0 | 10 | < th | dose independent | rect. | 8 | 1 |
| 194 | 159.39 | temperature | 25.0 | 30 | > th | dose independent | rect. | 5 | 1 |
| 196 | 159.43 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 5 | 1 |
| 208 | 159.71 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 216 | 160.20 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 3 | 1 |
| 217 | 160.20 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 231 | 161.06 | humidity | 80.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 239 | 161.46 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 240 | 161.50 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 248 | 161.50 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 261 | 161.55 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 305 | 162.44 | wind | 3.0 | 90 | > th | dose independent | rect. | 5 | 3 |
| 322 | 162.99 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 324 | 163.08 | humidity | 80.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 331 | 163.33 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 376 | 163.96 | humidity | 80.0 | 720 | < th | dose independent | rect. | 6 | 1 |
| 449 | 165.01 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 2 |
| 506 | 165.41 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 11 |
| 521 | 165.42 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 11 |
| 529 | 165.43 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 3 | 1 |
| 537 | 165.43 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 1 |
| 609 | 165.67 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 10 |
| 633 | 165.82 | wind | 5.0 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 653 | 165.91 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 685 | 166.06 | precipitation | 0.1 | 30 | < th | dose independent | sin | 4 | NA |
| 688 | 166.06 | precipitation | 0.1 | 30 | < th | dose dependent | sin | 4 | NA |
| 698 | 166.11 | wind | 9.0 | 720 | > th | dose independent | rect. | 20 | 1 |
| 701 | 166.11 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 3 |
| 702 | 166.11 | wind | 9.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 722 | 166.24 | precipitation | 0.1 | 30 | > th | dose independent | sin | 4 | NA |
| 727 | 166.25 | precipitation | 0.1 | 30 | > th | dose dependent | sin | 4 | NA |
| 791 | 166.44 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 2 |
| 811 | 166.48 | wind | 5.0 | 720 | < th | dose independent | rect. | 18 | 10 |
| 894 | 166.68 | wind | 7.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 903 | 166.70 | wind | 3.0 | 720 | > th | dose dependent | rect. | 20 | 12 |
| 931 | 166.75 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 971 | 166.78 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 976 | 166.78 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
