Os01g0945200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino acid/polyamine transporter I family protein.
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Os01g0945200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino acid/polyamine transporter I family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.18 | 0.568 | 10.4 | -0.00811 | 4.68 | -2.75 | -0.197 | -1.2 | 0.512 | 16.1 | 10.1 | 79 | 3.08 | 18.3 |
| 147.76 | 0.566 | 10.4 | 0.0949 | 4.69 | -2.75 | -0.835 | -- | 0.527 | 16.1 | 9.569 | 77 | 3.08 | 18.3 |
| 146.13 | 0.563 | 10.4 | -0.00806 | 4.71 | -2.78 | -- | -1.3 | 0.514 | 16.1 | 10.45 | 79 | 3.13 | 18.3 |
| 149.61 | 0.57 | 10.4 | 0.125 | 4.69 | -2.79 | -- | -- | 0.553 | 16.1 | 10.39 | 88 | 2.96 | 18.3 |
| 737.04 | 1.27 | 10.4 | -0.7 | -- | 2.18 | -- | -1.72 | 0.133 | -- | 5.175 | 2742 | 5.28 | 19 |
| 265.16 | 0.763 | 10.4 | -0.322 | 3.53 | -- | -1.05 | -- | 0.295 | 17.3 | -- | -- | -- | -- |
| 267.92 | 0.767 | 10.4 | -0.321 | 3.53 | -- | -- | -- | 0.29 | 17.3 | -- | -- | -- | -- |
| 696.39 | 1.23 | 10.4 | -0.577 | -- | 2.33 | -- | -- | 0.353 | -- | -24.91 | 28456 | 9.31 | 20.3 |
| 149.9 | 0.57 | 10.4 | -- | 4.68 | -2.77 | -- | -- | 0.538 | 16.1 | 10.04 | 94 | 2.92 | 18.4 |
| 916.47 | 1.41 | 10.4 | -0.442 | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
| 270.64 | 0.77 | 10.4 | -- | 3.53 | -- | -- | -- | 0.326 | 17.3 | -- | -- | -- | -- |
| 415.23 | 0.952 | 10.4 | -- | -- | 2.93 | -- | -- | 0.357 | -- | 4.195 | 25 | 11.6 | 14.2 |
| 921.62 | 1.42 | 10.4 | -- | -- | -- | -- | -- | 0.252 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.81 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 18 |
| 3 | 151.20 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 4 | 151.36 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 41 | 162.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 42 | 162.63 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 101 | 173.03 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 123 | 175.31 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 126 | 175.49 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 135 | 176.04 | temperature | 30.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 156 | 177.36 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 159 | 177.41 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 162 | 177.57 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 174 | 177.98 | wind | 3.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 184 | 178.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 221 | 180.36 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 222 | 180.41 | temperature | 20.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 236 | 180.92 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 237 | 181.01 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 245 | 181.38 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 22 |
| 254 | 181.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 6 | 22 |
| 281 | 182.54 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 358 | 184.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 20 |
| 359 | 184.86 | temperature | 30.0 | 270 | < th | dose independent | rect. | 20 | 17 |
| 362 | 184.89 | wind | 3.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 374 | 185.13 | wind | 3.0 | 90 | < th | dose dependent | rect. | 3 | 17 |
| 384 | 185.44 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 9 |
| 415 | 186.19 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 6 |
| 417 | 186.19 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 419 | 186.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 458 | 186.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 18 |
| 459 | 186.84 | temperature | 30.0 | 30 | < th | dose independent | rect. | 9 | 18 |
| 491 | 187.39 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 493 | 187.46 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 2 | 3 |
| 504 | 187.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 505 | 187.64 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 506 | 187.64 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 507 | 187.64 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 508 | 187.64 | radiation | 1.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 513 | 187.64 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 514 | 187.64 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 515 | 187.64 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 521 | 187.66 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 18 |
| 522 | 187.66 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 527 | 187.73 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 528 | 187.73 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 12 |
| 532 | 187.74 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 6 |
| 533 | 187.74 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 538 | 187.85 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 19 |
| 539 | 187.86 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 553 | 188.03 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 577 | 188.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 578 | 188.22 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 579 | 188.22 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 582 | 188.22 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 583 | 188.22 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 589 | 188.22 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 590 | 188.22 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 591 | 188.22 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 600 | 188.30 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 602 | 188.34 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 661 | 189.08 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 18 | 4 |
| 683 | 189.37 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 717 | 189.53 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 746 | 189.84 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 753 | 189.90 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 783 | 190.10 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 806 | 190.38 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 14 |
| 823 | 190.63 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 829 | 190.68 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 840 | 190.75 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 14 |
| 843 | 190.77 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 849 | 190.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 852 | 190.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 881 | 191.09 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 6 |
| 886 | 191.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 887 | 191.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 890 | 191.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 892 | 191.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 893 | 191.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 896 | 191.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 897 | 191.17 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 901 | 191.17 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 923 | 191.35 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 18 |
| 925 | 191.35 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 932 | 191.39 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 933 | 191.39 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 934 | 191.39 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 937 | 191.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 3 |
| 938 | 191.39 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 943 | 191.39 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 21 |
| 944 | 191.39 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 957 | 191.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 3 |
| 958 | 191.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 3 |
| 960 | 191.48 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 970 | 191.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 10 |
| 971 | 191.59 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 10 |
| 972 | 191.59 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 14 |
| 975 | 191.62 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 3 |