Os01g0944800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Beta-1,3-glucanase precursor.
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Os01g0944800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Beta-1,3-glucanase precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 428.22 | 0.972 | 3.86 | 1.21 | 0.658 | 1.1 | 0.637 | 1.41 | 0.483 | 11.4 | 1015 | 4509 | -- | -- |
| 431.71 | 0.968 | 3.84 | 1.32 | 0.664 | 0.951 | 0.635 | -- | 0.519 | 11.4 | 1014 | 4427 | -- | -- |
| 429.92 | 0.966 | 3.86 | 1.24 | 0.654 | 1.09 | -- | 1.41 | 0.485 | 11.6 | 1015 | 4509 | -- | -- |
| 433.27 | 0.969 | 3.85 | 1.36 | 0.645 | 0.923 | -- | -- | 0.525 | 11.5 | 1014 | 4484 | -- | -- |
| 456.85 | 0.995 | 3.86 | 1.23 | -- | 1.13 | -- | 1.38 | 0.483 | -- | 1015 | 4491 | -- | -- |
| 459.8 | 1.01 | 3.88 | 1.3 | 0.65 | -- | 0.518 | -- | 0.389 | 11.7 | -- | -- | -- | -- |
| 460.94 | 1.01 | 3.88 | 1.32 | 0.648 | -- | -- | -- | 0.392 | 11.8 | -- | -- | -- | -- |
| 459.24 | 0.998 | 3.87 | 1.31 | -- | 0.99 | -- | -- | 0.498 | -- | 1014 | 4174 | -- | -- |
| 479.4 | 1.02 | 3.87 | -- | 0.626 | 0.992 | -- | -- | 0.369 | 11.3 | 1014 | 4114 | -- | -- |
| 487.37 | 1.03 | 3.89 | 1.3 | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
| 507.11 | 1.05 | 3.91 | -- | 0.632 | -- | -- | -- | 0.244 | 11.7 | -- | -- | -- | -- |
| 503.75 | 1.05 | 3.9 | -- | -- | 1.01 | -- | -- | 0.357 | -- | 1014 | 4058 | -- | -- |
| 532.25 | 1.08 | 3.92 | -- | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 417.11 | temperature | 20 | 30 | > th | dose dependent | rect. | 16 | 13 |
| 10 | 422.88 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 15 |
| 27 | 425.61 | wind | 3 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 28 | 425.65 | wind | 3 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 32 | 425.98 | humidity | 50 | 720 | > th | dose independent | rect. | 12 | 8 |
| 37 | 426.50 | temperature | 30 | 10 | < th | dose dependent | sin | 15 | NA |
| 40 | 426.62 | temperature | 10 | 90 | > th | dose dependent | sin | 15 | NA |
| 42 | 426.70 | temperature | 10 | 10 | > th | dose dependent | sin | 14 | NA |
| 50 | 426.91 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 11 |
| 57 | 427.04 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 67 | 427.38 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 21 | 13 |
| 81 | 427.57 | humidity | 50 | 4320 | < th | dose independent | rect. | 12 | 5 |
| 88 | 427.65 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 96 | 427.72 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 107 | 427.80 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 111 | 427.82 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 113 | 427.83 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 120 | 427.87 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 20 | 14 |
| 123 | 427.89 | wind | 3 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 124 | 427.90 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 21 | 13 |
| 125 | 427.90 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 132 | 427.93 | humidity | 50 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 138 | 427.95 | humidity | 50 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 146 | 427.98 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 166 | 428.07 | atmosphere | 1015 | 4320 | > th | dose dependent | sin | 9 | NA |
| 184 | 428.13 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 18 |
| 216 | 428.23 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 220 | 428.23 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 239 | 428.29 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 265 | 428.35 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 269 | 428.36 | atmosphere | 1015 | 4320 | > th | dose independent | sin | 9 | NA |
| 273 | 428.38 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 1 | 9 |
| 282 | 428.40 | atmosphere | 1015 | 4320 | < th | dose independent | sin | 9 | NA |
| 315 | 428.44 | temperature | 25 | 10 | > th | dose independent | rect. | 16 | 13 |
| 355 | 428.50 | humidity | 50 | 720 | > th | dose independent | rect. | 18 | 23 |
| 371 | 428.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 378 | 428.56 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 12 |
| 397 | 428.59 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 418 | 428.63 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 7 |
| 443 | 428.66 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 19 |
| 472 | 428.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 12 | 22 |
| 552 | 428.81 | humidity | 50 | 4320 | < th | dose dependent | rect. | 13 | 4 |
| 620 | 428.96 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 691 | 429.07 | humidity | 50 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 696 | 429.08 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 4 | 21 |
| 721 | 429.12 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 17 |
| 749 | 429.13 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 4 | 22 |
| 757 | 429.15 | atmosphere | 1015 | 4320 | > th | dose dependent | no | NA | NA |
| 788 | 429.21 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 12 |
| 795 | 429.21 | atmosphere | 1015 | 4320 | > th | dose dependent | rect. | 7 | 23 |
| 806 | 429.24 | atmosphere | 1015 | 4320 | > th | dose independent | no | NA | NA |
| 808 | 429.24 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 1 |
| 849 | 429.32 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 902 | 429.34 | temperature | 20 | 30 | > th | dose dependent | rect. | 16 | 20 |
| 904 | 429.35 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 909 | 429.35 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 7 | 23 |
| 929 | 429.38 | atmosphere | 1015 | 4320 | > th | dose independent | rect. | 21 | 4 |
| 932 | 429.38 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 4 | 22 |
| 953 | 429.42 | humidity | 50 | 4320 | < th | dose independent | sin | 20 | NA |
| 954 | 429.42 | atmosphere | 1015 | 4320 | < th | dose independent | no | NA | NA |
| 980 | 429.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 989 | 429.47 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 1 | 23 |
| 993 | 429.48 | atmosphere | 1015 | 4320 | < th | dose independent | rect. | 21 | 2 |