Os01g0944700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3-glucanase precursor.
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Os01g0944700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3-glucanase precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1030.21 | 1.51 | 5.79 | -4.07 | 1.35 | 6.85 | -0.125 | -5.84 | 0.833 | 7.91 | 20.01 | 2018 | 22.7 | -- |
| 1050.71 | 1.51 | 5.71 | -2.82 | 1.31 | 7.12 | 0.155 | -- | 1.09 | 6.97 | 18.44 | 2043 | 22.8 | -- |
| 1026.83 | 1.49 | 5.78 | -3.95 | 1.19 | 6.85 | -- | -5.02 | 0.834 | 7.81 | 19.13 | 2054 | 23.2 | -- |
| 1046.03 | 1.51 | 5.63 | -2.71 | 1.14 | 6.71 | -- | -- | 1.16 | 7.72 | 18.83 | 2064 | 23.3 | -- |
| 1057.06 | 1.51 | 5.82 | -3.82 | -- | 6.91 | -- | -4.09 | 0.774 | -- | 18.1 | 2008 | 0.3 | -- |
| 1976.48 | 2.08 | 5.29 | -0.325 | 1.37 | -- | 0.136 | -- | 2.63 | 10.5 | -- | -- | -- | -- |
| 1976.56 | 2.08 | 5.29 | -0.32 | 1.37 | -- | -- | -- | 2.63 | 10.5 | -- | -- | -- | -- |
| 1071.63 | 1.52 | 5.66 | -2.78 | -- | 6.85 | -- | -- | 1.08 | -- | 17.76 | 2009 | 0.324 | -- |
| 1193 | 1.61 | 5.53 | -- | 1.18 | 4.88 | -- | -- | 1.67 | 10.2 | 21.39 | 2092 | 0.962 | -- |
| 2091.88 | 2.14 | 5.33 | -0.343 | -- | -- | -- | -- | 2.62 | -- | -- | -- | -- | -- |
| 1979.26 | 2.08 | 5.29 | -- | 1.37 | -- | -- | -- | 2.67 | 10.5 | -- | -- | -- | -- |
| 1245.3 | 1.64 | 5.57 | -- | -- | 5.62 | -- | -- | 1.56 | -- | 18.7 | 1983 | 0.283 | -- |
| 2094.99 | 2.14 | 5.32 | -- | -- | -- | -- | -- | 2.66 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 969.12 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 7 | 972.18 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 13 | 974.80 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 45 | 1008.60 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 46 | 1017.41 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 58 | 1022.41 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 59 | 1025.18 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 60 | 1026.02 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 62 | 1029.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 63 | 1030.09 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 82 | 1044.75 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 91 | 1049.35 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 110 | 1051.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 116 | 1053.11 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 117 | 1054.00 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 119 | 1054.76 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 135 | 1056.07 | temperature | 30 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 141 | 1057.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 19 |
| 149 | 1058.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 159 | 1059.87 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 167 | 1060.90 | radiation | 1 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 169 | 1061.07 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 172 | 1061.13 | radiation | 1 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 181 | 1061.88 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 215 | 1063.70 | wind | 3 | 43200 | > th | dose dependent | rect. | 2 | 13 |
| 237 | 1066.90 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 241 | 1067.91 | wind | 3 | 43200 | > th | dose dependent | rect. | 20 | 20 |
| 244 | 1068.74 | wind | 3 | 43200 | > th | dose dependent | rect. | 24 | 15 |
| 249 | 1069.23 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 298 | 1073.22 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 14 |
| 299 | 1073.22 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 305 | 1073.68 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 21 |
| 309 | 1074.11 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 315 | 1074.55 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 317 | 1074.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 322 | 1074.98 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 338 | 1075.59 | wind | 3 | 43200 | > th | dose dependent | sin | 4 | NA |
| 339 | 1075.61 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 21 |
| 347 | 1075.97 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 493 | 1083.02 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 544 | 1085.24 | wind | 5 | 43200 | < th | dose independent | sin | 3 | NA |
| 566 | 1086.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 21 |
| 581 | 1086.88 | wind | 5 | 43200 | > th | dose independent | sin | 3 | NA |
| 584 | 1087.08 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |
| 604 | 1088.04 | wind | 3 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 637 | 1089.40 | radiation | 1 | 14400 | > th | dose independent | sin | 12 | NA |
| 659 | 1089.90 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 673 | 1090.51 | wind | 9 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 751 | 1093.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 867 | 1096.17 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 872 | 1096.34 | radiation | 1 | 14400 | < th | dose independent | sin | 12 | NA |
| 877 | 1096.52 | atmosphere | 1000 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 932 | 1098.15 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |