Os01g0944100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0944100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 355.17 | 0.878 | 7.65 | 2.09 | 0.308 | 3.37 | -2.85 | -1.71 | 0.214 | 7.35 | 15 | 10 | 6 | 15 |
| 354.61 | 0.877 | 7.63 | 2.38 | 0.302 | 3.28 | -2.61 | -- | 0.282 | 7.91 | 14.28 | 10 | 6.03 | 14.9 |
| 369.95 | 0.896 | 7.67 | 2.08 | 0.309 | 3.41 | -- | -1.87 | 0.207 | 5.2 | 14.34 | 10 | 6.03 | 14.9 |
| 373.81 | 0.9 | 7.65 | 2.24 | 0.522 | 3.64 | -- | -- | 0.248 | 4.19 | 12.86 | 8 | 6.34 | 14.6 |
| 373.16 | 0.9 | 7.65 | 2.07 | -- | 3.31 | -- | -1.85 | 0.301 | -- | 13.99 | 8 | 6.14 | 14.8 |
| 533.07 | 1.08 | 7.52 | 2.65 | 2.47 | -- | -0.358 | -- | 0.732 | 13.7 | -- | -- | -- | -- |
| 533.54 | 1.08 | 7.52 | 2.64 | 2.47 | -- | -- | -- | 0.731 | 13.8 | -- | -- | -- | -- |
| 380.24 | 0.908 | 7.63 | 2.21 | -- | 3.2 | -- | -- | 0.336 | -- | 12.95 | 7 | 6.16 | 14.8 |
| 491.93 | 1.03 | 7.69 | -- | 0.808 | 4.17 | -- | -- | -0.0266 | 3.4 | 15.21 | 6 | 6.46 | 14.5 |
| 903.4 | 1.4 | 7.55 | 2.54 | -- | -- | -- | -- | 0.675 | -- | -- | -- | -- | -- |
| 717.22 | 1.25 | 7.59 | -- | 2.42 | -- | -- | -- | 0.437 | 13.7 | -- | -- | -- | -- |
| 505.09 | 1.05 | 7.68 | -- | -- | 3.54 | -- | -- | 0.0809 | -- | 16.24 | 14 | 6.77 | 14.1 |
| 1073.46 | 1.53 | 7.61 | -- | -- | -- | -- | -- | 0.393 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 355.95 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 15 |
| 13 | 372.91 | humidity | 90.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 14 | 372.94 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 6 | 20 |
| 17 | 374.16 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 10 | 20 |
| 23 | 377.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 20 |
| 27 | 378.07 | temperature | 30.0 | 30 | < th | dose independent | rect. | 10 | 20 |
| 59 | 386.20 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 80 | 391.10 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 130 | 397.53 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 153 | 400.24 | humidity | 70.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 157 | 400.54 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 2 |
| 206 | 404.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 10 |
| 209 | 404.34 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 10 | 20 |
| 219 | 404.70 | radiation | 1.0 | 90 | < th | dose independent | rect. | 20 | 23 |
| 222 | 404.78 | humidity | 90.0 | 10 | < th | dose independent | sin | 0 | NA |
| 224 | 404.82 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 4 |
| 243 | 406.21 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 265 | 407.71 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 23 |
| 267 | 407.91 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 270 | 408.21 | radiation | 1.0 | 90 | > th | dose independent | rect. | 6 | 13 |
| 280 | 408.22 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 10 |
| 294 | 408.58 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 296 | 408.60 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 312 | 409.21 | humidity | 70.0 | 10 | > th | dose dependent | no | NA | NA |
| 320 | 409.69 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 12 | 18 |
| 321 | 409.72 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 328 | 409.88 | radiation | 10.0 | 90 | < th | dose dependent | sin | 9 | NA |
| 331 | 410.08 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 337 | 410.31 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 10 |
| 339 | 410.41 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 11 |
| 346 | 410.83 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 17 | 13 |
| 373 | 412.03 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 380 | 412.28 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 382 | 412.35 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 12 |
| 393 | 412.74 | radiation | 1.0 | 720 | < th | dose dependent | sin | 10 | NA |
| 410 | 413.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 23 |
| 424 | 413.68 | radiation | 10.0 | 90 | < th | dose dependent | sin | 11 | NA |
| 455 | 414.23 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 23 |
| 465 | 414.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 21 |
| 486 | 415.15 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 23 |
| 558 | 417.00 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 22 |
| 596 | 417.81 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 605 | 417.93 | radiation | 10.0 | 90 | < th | dose dependent | no | NA | NA |
| 651 | 418.79 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 659 | 418.91 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 14 |
| 668 | 419.04 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 22 |
| 673 | 419.10 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 23 |
| 688 | 419.37 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 19 | 11 |
| 693 | 419.45 | radiation | 1.0 | 90 | > th | dose independent | no | NA | NA |
| 694 | 419.45 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 742 | 419.52 | radiation | 1.0 | 90 | < th | dose independent | rect. | 10 | 22 |
| 758 | 419.74 | radiation | 1.0 | 90 | < th | dose independent | no | NA | NA |
| 777 | 419.91 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 19 |
| 779 | 419.97 | radiation | 1.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 782 | 420.08 | radiation | 1.0 | 720 | > th | dose independent | sin | 11 | NA |
| 829 | 420.86 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 832 | 420.95 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 5 |
| 846 | 421.22 | humidity | 80.0 | 10 | > th | dose dependent | sin | 2 | NA |
| 865 | 421.60 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 866 | 421.62 | radiation | 1.0 | 270 | < th | dose independent | sin | 11 | NA |
| 867 | 421.62 | wind | 9.0 | 10 | < th | dose independent | rect. | 6 | 14 |
| 908 | 422.30 | humidity | 70.0 | 90 | > th | dose independent | rect. | 19 | 11 |
| 911 | 422.34 | humidity | 90.0 | 30 | < th | dose independent | rect. | 4 | 6 |
| 929 | 422.54 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 941 | 422.78 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 11 |
| 957 | 423.09 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 14 |
| 958 | 423.09 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 14 |
| 985 | 423.48 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 10 |