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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0941500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glucan endo-1,3-beta-glucosidase GII precursor (EC 3.2.1.39) ((1->3)- beta-glucan endohydrolase GII) ((1->3)-beta-glucanase isoenzyme GII) (Beta-1,3-endoglucanase GII).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.4 (0.0514) R2 : 0.101
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.52 (0.225) R2dE : 0.102 R2E : 0.101
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0182 (0.114) R2dN8 : 7.28e-05 R2N8 : -0.00166
σ : 0.951
deviance : 416.73
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_____
C
peak time of C : --
E
wheather : atmosphere
threshold : 1007
memory length : 1384
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
401.09 0.941 3.38 -0.178 0.429 1.4 0.632 1.78 0.0231 13.6 1008 1396 -- --
403.09 0.935 3.39 -0.206 0.439 1.57 0.567 -- 0.0467 13.7 1008 1272 -- --
402.66 0.935 3.38 -0.16 0.432 1.42 -- 1.64 0.0309 13.7 1008 1384 -- --
404.39 0.937 3.39 -0.194 0.44 1.57 -- -- 0.0581 13.8 1008 1291 -- --
413.56 0.952 3.4 -0.125 -- 1.26 -- 2.26 -0.0267 -- 1008 1422 -- --
447.15 0.991 3.46 -0.0761 0.397 -- 0.582 -- -0.255 13.6 -- -- -- --
448.49 0.992 3.46 -0.0571 0.397 -- -- -- -0.252 13.7 -- -- -- --
415.6 0.949 3.41 -0.204 -- 1.54 -- -- -0.000159 -- 1007 1388 -- --
405.33 0.938 3.39 -- 0.439 1.56 -- -- 0.07 13.7 1008 1284 -- --
458.1 1 3.47 -0.0732 -- -- -- -- -0.261 -- -- -- -- --
448.58 0.991 3.46 -- 0.398 -- -- -- -0.246 13.7 -- -- -- --
416.73 0.951 3.4 -- -- 1.52 -- -- 0.0182 -- 1007 1384 -- --
458.24 0.999 3.46 -- -- -- -- -- -0.253 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 396.64 atmosphere 1010 1440 < th dose dependent rect. 18 1
2 397.38 atmosphere 1010 720 < th dose dependent rect. 15 17
9 398.07 atmosphere 1010 720 < th dose dependent sin 12 NA
22 398.92 atmosphere 995 720 > th dose dependent rect. 17 14
38 399.76 atmosphere 1010 1440 < th dose dependent rect. 9 13
77 400.37 atmosphere 1010 1440 < th dose dependent sin 19 NA
167 401.07 atmosphere 995 720 > th dose dependent sin 12 NA
208 401.37 atmosphere 995 1440 > th dose dependent rect. 18 1
244 401.57 atmosphere 1010 10 < th dose dependent rect. 16 23
288 401.81 atmosphere 1010 1440 < th dose dependent no NA NA
316 401.96 atmosphere 1000 720 < th dose independent rect. 13 17
330 402.01 atmosphere 1010 1440 < th dose dependent rect. 21 23
349 402.09 atmosphere 1000 720 > th dose independent rect. 13 18
400 402.31 atmosphere 1005 10 < th dose dependent rect. 18 20
402 402.32 atmosphere 1000 1440 > th dose independent rect. 21 1
414 402.37 atmosphere 1000 720 < th dose independent sin 14 NA
468 402.52 atmosphere 995 1440 > th dose dependent rect. 9 13
510 402.67 atmosphere 1000 270 < th dose independent rect. 17 21
558 402.78 atmosphere 995 1440 > th dose dependent rect. 5 17
562 402.79 atmosphere 1005 1440 < th dose dependent rect. 11 1
595 402.87 atmosphere 1000 1440 < th dose independent rect. 21 1
614 402.91 atmosphere 1005 1440 < th dose dependent rect. 9 3
646 402.99 atmosphere 995 1440 > th dose dependent sin 21 NA
665 403.04 atmosphere 1010 1440 < th dose dependent rect. 9 6
697 403.09 atmosphere 1000 720 > th dose independent sin 14 NA
709 403.10 atmosphere 1010 270 < th dose dependent sin 8 NA
743 403.17 atmosphere 1005 1440 < th dose independent rect. 8 1
822 403.32 atmosphere 1000 90 < th dose independent rect. 17 18
840 403.36 atmosphere 995 720 > th dose dependent rect. 9 22
869 403.42 atmosphere 1000 10 < th dose independent rect. 18 20
911 403.49 atmosphere 1000 10 < th dose independent rect. 18 16