Os01g0941400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Beta-1,3-glucanase precursor.
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Os01g0941400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Beta-1,3-glucanase precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 675.29 | 1.22 | 6.73 | -0.902 | 0.965 | 0.48 | 5.18e-05 | 10.1 | 0.109 | 4.74 | 999.9 | 13644 | -- | -- |
| 723.06 | 1.25 | 6.87 | -1.37 | 0.992 | 2.51 | -0.312 | -- | 0.203 | 4.59 | 998.9 | 12190 | -- | -- |
| 675.29 | 1.21 | 6.73 | -0.902 | 0.965 | 0.48 | -- | 10.1 | 0.109 | 4.74 | 999.9 | 13644 | -- | -- |
| 722.98 | 1.25 | 6.87 | -1.39 | 0.986 | 2.53 | -- | -- | 0.215 | 4.57 | 998.9 | 12210 | -- | -- |
| 724.51 | 1.25 | 6.73 | -0.843 | -- | 0.385 | -- | 10.4 | 0.124 | -- | 999.8 | 13634 | -- | -- |
| 876.48 | 1.39 | 6.93 | -0.819 | 0.942 | -- | -0.166 | -- | -0.0368 | 4.62 | -- | -- | -- | -- |
| 876.55 | 1.39 | 6.93 | -0.818 | 0.942 | -- | -- | -- | -0.0359 | 4.66 | -- | -- | -- | -- |
| 774.68 | 1.3 | 6.88 | -1.34 | -- | 2.49 | -- | -- | 0.236 | -- | 999 | 12165 | -- | -- |
| 771.38 | 1.29 | 6.87 | -- | 0.961 | 2.29 | -- | -- | 0.288 | 4.6 | 999 | 12075 | -- | -- |
| 923.66 | 1.42 | 6.93 | -0.782 | -- | -- | -- | -- | -0.0113 | -- | -- | -- | -- | -- |
| 894.19 | 1.4 | 6.91 | -- | 0.927 | -- | -- | -- | 0.0552 | 4.69 | -- | -- | -- | -- |
| 819.37 | 1.33 | 6.85 | -- | -- | 2.18 | -- | -- | 0.343 | -- | 999 | 12078 | -- | -- |
| 939.81 | 1.43 | 6.92 | -- | -- | -- | -- | -- | 0.0755 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 616.72 | wind | 7 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 2 | 619.40 | wind | 7 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 4 | 619.86 | wind | 7 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 63 | 634.54 | wind | 7 | 14400 | > th | dose dependent | rect. | 14 | 16 |
| 73 | 635.10 | wind | 7 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 99 | 636.79 | wind | 7 | 14400 | < th | dose independent | rect. | 13 | 17 |
| 125 | 638.80 | wind | 7 | 14400 | > th | dose independent | sin | 17 | NA |
| 130 | 639.47 | wind | 7 | 14400 | > th | dose dependent | sin | 16 | NA |
| 153 | 641.04 | wind | 7 | 14400 | < th | dose independent | sin | 17 | NA |
| 234 | 647.53 | wind | 7 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 392 | 656.28 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 16 |
| 450 | 659.96 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 16 |
| 570 | 664.55 | wind | 7 | 14400 | > th | dose dependent | rect. | 5 | 16 |
| 625 | 666.49 | wind | 7 | 14400 | > th | dose independent | no | NA | NA |
| 706 | 669.18 | wind | 7 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 754 | 671.02 | wind | 7 | 14400 | < th | dose independent | no | NA | NA |
| 828 | 673.10 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 870 | 674.09 | wind | 9 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 876 | 674.32 | wind | 7 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 892 | 674.74 | wind | 7 | 14400 | > th | dose independent | rect. | 17 | 23 |
| 908 | 675.05 | wind | 7 | 14400 | > th | dose dependent | no | NA | NA |
| 953 | 676.70 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 954 | 676.73 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 962 | 676.87 | wind | 7 | 14400 | > th | dose dependent | rect. | 16 | 23 |
| 963 | 676.88 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 971 | 677.05 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 980 | 677.13 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 981 | 677.13 | wind | 9 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 998 | 677.27 | atmosphere | 1000 | 14400 | > th | dose independent | rect. | 17 | 9 |
| 999 | 677.28 | atmosphere | 1000 | 14400 | < th | dose independent | rect. | 19 | 6 |