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Os01g0941200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucan endo-1,3-beta-glucosidase GII precursor (EC 3.2.1.39) ((1->3)- beta-glucan endohydrolase GII) ((1->3)-beta-glucanase isoenzyme GII) (Beta-1,3-endoglucanase GII).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.01 | 0.286 | 3.14 | 0.274 | 0.0809 | 0.177 | 0.00782 | 0.998 | -0.0723 | 7.11 | 80 | 5902 | -- | -- |
| 38.08 | 0.287 | 3.14 | 0.169 | 0.0845 | 0.235 | -0.0133 | -- | -0.126 | 6.87 | 81 | 7354 | -- | -- |
| 37.01 | 0.283 | 3.14 | 0.275 | 0.0806 | 0.177 | -- | 0.998 | -0.0723 | 7.13 | 79.96 | 5890 | -- | -- |
| 38.08 | 0.287 | 3.14 | 0.171 | 0.0823 | 0.237 | -- | -- | -0.127 | 6.86 | 81.01 | 7350 | -- | -- |
| 37.34 | 0.285 | 3.14 | 0.277 | -- | 0.179 | -- | 0.984 | -0.0727 | -- | 79.73 | 5827 | -- | -- |
| 39.08 | 0.293 | 3.12 | 0.137 | 0.0801 | -- | -0.00235 | -- | -0.0348 | 7.15 | -- | -- | -- | -- |
| 39.08 | 0.293 | 3.12 | 0.137 | 0.0801 | -- | -- | -- | -0.0347 | 7.15 | -- | -- | -- | -- |
| 38.44 | 0.289 | 3.15 | 0.172 | -- | 0.248 | -- | -- | -0.129 | -- | 82 | 7066 | -- | -- |
| 38.83 | 0.29 | 3.15 | -- | 0.086 | 0.205 | -- | -- | -0.134 | 6.8 | 81.98 | 7348 | -- | -- |
| 39.42 | 0.293 | 3.12 | 0.139 | -- | -- | -- | -- | -0.0333 | -- | -- | -- | -- | -- |
| 39.58 | 0.294 | 3.13 | -- | 0.0815 | -- | -- | -- | -0.05 | 7.04 | -- | -- | -- | -- |
| 39.19 | 0.292 | 3.15 | -- | -- | 0.213 | -- | -- | -0.134 | -- | 81.95 | 7066 | -- | -- |
| 39.93 | 0.295 | 3.13 | -- | -- | -- | -- | -- | -0.0487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.69 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 2 | 35.71 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 6 | 35.81 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 8 | 35.82 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 9 | 35.84 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 22 | 35.91 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 23 | 35.91 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 24 | 35.91 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 27 | 35.99 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 44 | 36.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 45 | 36.15 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 22 | 1 |
| 46 | 36.15 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 51 | 36.20 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 52 | 36.20 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 1 |
| 54 | 36.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 57 | 36.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 61 | 36.20 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 71 | 36.20 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 72 | 36.20 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 92 | 36.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 106 | 36.21 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 107 | 36.21 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 108 | 36.22 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 109 | 36.22 | wind | 3.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 111 | 36.22 | humidity | 80.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 112 | 36.22 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 113 | 36.22 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 125 | 36.22 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 132 | 36.23 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 134 | 36.23 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 135 | 36.23 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 138 | 36.23 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 139 | 36.23 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 141 | 36.23 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 146 | 36.23 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 148 | 36.23 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 149 | 36.23 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 150 | 36.23 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 154 | 36.23 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 159 | 36.23 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 162 | 36.24 | wind | 5.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 166 | 36.25 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 168 | 36.25 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 169 | 36.25 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 170 | 36.26 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 23 |
| 171 | 36.26 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 177 | 36.28 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 181 | 36.29 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 240 | 36.39 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 241 | 36.39 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 251 | 36.41 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 264 | 36.47 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 267 | 36.47 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 10 | 6 |
| 294 | 36.51 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 295 | 36.51 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 317 | 36.55 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 336 | 36.56 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 393 | 36.62 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 430 | 36.66 | humidity | 50.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 431 | 36.66 | humidity | 60.0 | 14400 | < th | dose dependent | no | NA | NA |
| 510 | 36.66 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 554 | 36.68 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 7 |
| 564 | 36.69 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 565 | 36.69 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 23 |
| 574 | 36.71 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 7 |
| 594 | 36.72 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 8 |
| 595 | 36.72 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 596 | 36.72 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 17 |
| 597 | 36.72 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 638 | 36.74 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 698 | 36.78 | humidity | 60.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 700 | 36.78 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 9 |
| 706 | 36.80 | humidity | 50.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 743 | 36.81 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 756 | 36.83 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 854 | 36.89 | humidity | 50.0 | 14400 | > th | dose independent | no | NA | NA |
| 977 | 36.89 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
