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Os01g0940700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucan endo-1,3-beta-glucosidase GII precursor (EC 3.2.1.39) ((1->3)- beta-glucan endohydrolase GII) ((1->3)-beta-glucanase isoenzyme GII) (Beta-1,3-endoglucanase GII).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 544.94 | 1.1 | 11.6 | -1.03 | 0.743 | -2.04 | 1.98 | -9.12 | -0.426 | 7.2 | 55.98 | 23818 | -- | -- |
| 689.24 | 1.22 | 11.5 | -1.74 | 0.862 | -2.31 | 1.12 | -- | -0.623 | 6.92 | 175 | 15280 | -- | -- |
| 544.69 | 1.09 | 11.6 | -1.05 | 0.673 | -1.87 | -- | -8.33 | -0.438 | 6.06 | 60 | 24726 | -- | -- |
| 685.07 | 1.22 | 11.4 | -1.8 | 0.907 | -2.42 | -- | -- | -0.564 | 6.31 | 209.5 | 12269 | -- | -- |
| 567.34 | 1.11 | 11.6 | -1.02 | -- | -1.86 | -- | -8.26 | -0.436 | -- | 60.17 | 24651 | -- | -- |
| 884.88 | 1.39 | 11.3 | -2.12 | 0.668 | -- | 1.2 | -- | 0.0855 | 6.55 | -- | -- | -- | -- |
| 887.55 | 1.4 | 11.3 | -2.1 | 0.688 | -- | -- | -- | 0.0796 | 5.86 | -- | -- | -- | -- |
| 683.34 | 1.22 | 11.4 | -1.44 | -- | -2.36 | -- | -- | -0.989 | -- | 6.484 | 20215 | -- | -- |
| 768.73 | 1.29 | 11.4 | -- | 0.867 | -2.52 | -- | -- | -0.505 | 6.79 | 275.7 | 15293 | -- | -- |
| 912.06 | 1.41 | 11.3 | -2.08 | -- | -- | -- | -- | 0.0956 | -- | -- | -- | -- | -- |
| 1004.23 | 1.48 | 11.3 | -- | 0.656 | -- | -- | -- | 0.314 | 6.01 | -- | -- | -- | -- |
| 797.52 | 1.32 | 11.4 | -- | -- | -2.48 | -- | -- | -0.459 | -- | 280.2 | 14461 | -- | -- |
| 1026.53 | 1.5 | 11.3 | -- | -- | -- | -- | -- | 0.327 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 539.35 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 3 | 543.48 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 4 | 544.37 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 5 | 544.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 2 |
| 9 | 546.28 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 10 | 547.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 11 | 547.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 12 | 547.54 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 13 | 547.81 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 16 | 548.87 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 36 | 552.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 40 | 553.57 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 44 | 555.30 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 45 | 555.57 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 48 | 555.62 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 11 | 6 |
| 52 | 555.92 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 12 | 4 |
| 73 | 557.79 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 78 | 558.09 | wind | 7.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 80 | 558.15 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 86 | 558.49 | humidity | 70.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 123 | 559.99 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 21 |
| 146 | 560.51 | wind | 7.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 152 | 560.66 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 18 | 20 |
| 157 | 560.75 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 15 | 15 |
| 166 | 560.89 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 168 | 560.90 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 1 | 13 |
| 208 | 561.67 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 11 | 19 |
| 211 | 561.72 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 212 | 561.72 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 234 | 562.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 235 | 562.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 243 | 562.16 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 14 | 22 |
| 247 | 562.23 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 248 | 562.24 | humidity | 70.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 274 | 562.60 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 275 | 562.60 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 277 | 562.61 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 292 | 562.82 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 328 | 563.26 | humidity | 80.0 | 43200 | < th | dose dependent | sin | 20 | NA |
| 353 | 563.54 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 368 | 563.63 | humidity | 70.0 | 43200 | < th | dose independent | no | NA | NA |
| 386 | 563.78 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 21 | 23 |
| 394 | 563.92 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 4 | 23 |
| 404 | 564.00 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 19 | 23 |
| 470 | 564.61 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 484 | 564.71 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 530 | 565.22 | wind | 7.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 562 | 565.38 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 585 | 565.67 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 588 | 565.72 | humidity | 70.0 | 43200 | > th | dose independent | no | NA | NA |
| 601 | 565.85 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 19 | 23 |
| 621 | 566.05 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 4 | 23 |
| 629 | 566.09 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 21 | 23 |
| 632 | 566.10 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 10 | 4 |
| 694 | 566.58 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 15 | 4 |
| 707 | 566.67 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 781 | 567.14 | wind | 7.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 799 | 567.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
