Os01g0939800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0939800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.66 | 0.471 | 2.8 | 0.377 | 0.0214 | -0.00556 | -0.419 | 5.37 | 0.0073 | 2.58 | 0.6 | 38 | -- | -- |
| 106.64 | 0.481 | 2.82 | 0.298 | 0.00471 | 0.654 | 0.166 | -- | 0.0109 | 13.4 | 0.09864 | 38 | -- | -- |
| 101.1 | 0.468 | 2.79 | 0.378 | 0.0674 | -0.0379 | -- | 5.3 | 0.0302 | 5.97 | 0.6 | 38 | -- | -- |
| 106.74 | 0.481 | 2.82 | 0.304 | 0.00686 | 0.643 | -- | -- | 0.00524 | 11.4 | 0.0009357 | 38 | -- | -- |
| 101.15 | 0.468 | 2.8 | 0.396 | -- | 0.0308 | -- | 5.49 | 0.0118 | -- | 0.133 | 39 | -- | -- |
| 109.3 | 0.49 | 2.82 | 0.339 | 0.1 | -- | -0.0676 | -- | -0.00854 | 5.17 | -- | -- | -- | -- |
| 109.31 | 0.49 | 2.82 | 0.339 | 0.1 | -- | -- | -- | -0.0082 | 5.27 | -- | -- | -- | -- |
| 106.75 | 0.481 | 2.82 | 0.306 | -- | 0.656 | -- | -- | 0.0103 | -- | 0.05698 | 38 | -- | -- |
| 109.16 | 0.487 | 2.83 | -- | 0.0178 | 0.725 | -- | -- | -0.0205 | 9.97 | 2.288e-06 | 38 | -- | -- |
| 109.83 | 0.49 | 2.82 | 0.342 | -- | -- | -- | -- | -0.00569 | -- | -- | -- | -- | -- |
| 112.34 | 0.496 | 2.83 | -- | 0.106 | -- | -- | -- | -0.0459 | 5.14 | -- | -- | -- | -- |
| 109.19 | 0.487 | 2.83 | -- | -- | 0.718 | -- | -- | -0.0216 | -- | 0.01886 | 38 | -- | -- |
| 112.92 | 0.496 | 2.83 | -- | -- | -- | -- | -- | -0.0437 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.31 | temperature | 20.0 | 270 | < th | dose independent | rect. | 22 | 1 |
| 4 | 99.28 | wind | 1.0 | 10 | < th | dose independent | rect. | 23 | 1 |
| 8 | 99.28 | wind | 1.0 | 10 | < th | dose dependent | rect. | 23 | 1 |
| 12 | 99.38 | temperature | 20.0 | 90 | > th | dose independent | rect. | 14 | 13 |
| 21 | 99.68 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 14 |
| 48 | 99.99 | wind | 1.0 | 90 | < th | dose dependent | rect. | 22 | 1 |
| 52 | 100.07 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 7 |
| 55 | 100.09 | temperature | 20.0 | 90 | < th | dose independent | rect. | 8 | 18 |
| 67 | 100.15 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 14 |
| 103 | 100.48 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 112 | 100.51 | wind | 1.0 | 30 | < th | dose dependent | rect. | 22 | 7 |
| 138 | 100.70 | wind | 1.0 | 30 | < th | dose dependent | rect. | 22 | 14 |
| 149 | 100.81 | wind | 1.0 | 30 | < th | dose dependent | rect. | 22 | 11 |
| 166 | 101.00 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 170 | 101.15 | wind | 1.0 | 90 | < th | dose independent | rect. | 22 | 2 |
| 171 | 101.15 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 17 |
| 173 | 101.16 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 19 |
| 180 | 101.22 | humidity | 80.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 181 | 101.22 | humidity | 80.0 | 10 | < th | dose independent | rect. | 24 | 2 |
| 185 | 101.22 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 186 | 101.22 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 24 | 2 |
| 243 | 101.43 | wind | 1.0 | 10 | < th | dose dependent | rect. | 4 | 21 |
| 260 | 101.46 | wind | 1.0 | 30 | < th | dose dependent | sin | 12 | NA |
| 297 | 101.68 | wind | 1.0 | 10 | < th | dose dependent | sin | 15 | NA |
| 314 | 101.73 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 315 | 101.73 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 316 | 101.73 | wind | 1.0 | 90 | < th | dose dependent | rect. | 11 | 13 |
| 322 | 101.78 | wind | 1.0 | 30 | < th | dose dependent | rect. | 15 | 21 |
| 344 | 101.83 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 23 |
| 412 | 102.00 | wind | 1.0 | 90 | < th | dose dependent | rect. | 6 | 18 |
| 426 | 102.05 | temperature | 20.0 | 90 | < th | dose independent | sin | 16 | NA |
| 443 | 102.13 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 454 | 102.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 9 | 17 |
| 464 | 102.18 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 474 | 102.19 | wind | 1.0 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 502 | 102.26 | wind | 1.0 | 30 | < th | dose independent | rect. | 23 | 6 |
| 532 | 102.30 | wind | 1.0 | 90 | < th | dose independent | rect. | 6 | 18 |
| 535 | 102.31 | temperature | 20.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 556 | 102.36 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 22 | 5 |
| 557 | 102.36 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 19 | 8 |
| 560 | 102.36 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 15 | 12 |
| 584 | 102.38 | wind | 1.0 | 30 | < th | dose independent | rect. | 23 | 13 |
| 618 | 102.41 | temperature | 20.0 | 90 | > th | dose independent | sin | 16 | NA |
| 647 | 102.48 | wind | 1.0 | 90 | < th | dose independent | rect. | 11 | 13 |
| 664 | 102.51 | wind | 1.0 | 30 | < th | dose independent | rect. | 23 | 10 |
| 717 | 102.54 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 13 | 16 |
| 761 | 102.57 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 9 | 20 |
| 846 | 102.67 | wind | 1.0 | 30 | < th | dose dependent | rect. | 11 | 22 |
| 923 | 102.77 | wind | 1.0 | 30 | < th | dose dependent | no | NA | NA |
| 941 | 102.78 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 942 | 102.78 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 983 | 102.85 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |