Os01g0937600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase aspartic, catalytic domain containing protein.
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Os01g0937600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase aspartic, catalytic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.75 | 0.512 | 2.93 | -0.153 | 0.203 | -0.636 | 0.46 | 2.35 | 0.119 | 14.3 | 1.094 | 16 | -- | -- |
| 123.3 | 0.517 | 2.91 | -0.0632 | 0.189 | -0.468 | 0.69 | -- | 0.144 | 14.3 | 1.081 | 15 | -- | -- |
| 119.48 | 0.509 | 2.93 | -0.145 | 0.201 | -0.632 | -- | 2.53 | 0.119 | 14 | 1.064 | 16 | -- | -- |
| 124.96 | 0.521 | 2.91 | -0.04 | 0.185 | -0.447 | -- | -- | 0.148 | 13.7 | 1.067 | 16 | -- | -- |
| 121.65 | 0.514 | 2.94 | -0.138 | -- | -0.528 | -- | 2.46 | 0.115 | -- | 1.054 | 16 | -- | -- |
| 128.29 | 0.531 | 2.91 | -0.00636 | 0.0984 | -- | 0.559 | -- | 0.14 | 13.6 | -- | -- | -- | -- |
| 129.15 | 0.532 | 2.91 | 0.0105 | 0.126 | -- | -- | -- | 0.142 | 10.8 | -- | -- | -- | -- |
| 126.85 | 0.525 | 2.91 | -0.0393 | -- | -0.357 | -- | -- | 0.143 | -- | 1.064 | 16 | -- | -- |
| 125 | 0.521 | 2.91 | -- | 0.184 | -0.432 | -- | -- | 0.152 | 13.5 | 1.053 | 15 | -- | -- |
| 130.13 | 0.533 | 2.91 | 0.00791 | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
| 129.15 | 0.532 | 2.91 | -- | 0.126 | -- | -- | -- | 0.141 | 10.8 | -- | -- | -- | -- |
| 126.89 | 0.525 | 2.91 | -- | -- | -0.352 | -- | -- | 0.147 | -- | 1.049 | 16 | -- | -- |
| 130.13 | 0.532 | 2.91 | -- | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.85 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 2 | 110.92 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 3 | 111.00 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 4 | 111.00 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 111.05 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 8 | 111.13 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 18 | 111.30 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 20 | 111.31 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 22 | 111.31 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 23 | 111.31 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 27 | 111.31 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 29 | 111.31 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 34 | 111.31 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 35 | 111.31 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 36 | 111.31 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 41 | 111.31 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 42 | 111.33 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 43 | 111.36 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 46 | 111.43 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 54 | 112.09 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 58 | 112.29 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 100 | 113.99 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 104 | 114.09 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 105 | 114.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 108 | 114.09 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 112 | 114.09 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 121 | 114.09 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 122 | 114.09 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 142 | 114.09 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 145 | 114.09 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 161 | 114.52 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 165 | 115.12 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 172 | 115.93 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 173 | 115.93 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 183 | 117.42 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 185 | 118.22 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 4 |
| 187 | 118.55 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 190 | 118.67 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 7 |
| 193 | 119.06 | wind | 1.0 | 10 | > th | dose independent | sin | 10 | NA |
| 209 | 119.72 | wind | 1.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 213 | 119.77 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 224 | 119.90 | wind | 1.0 | 10 | < th | dose independent | rect. | 2 | 16 |
| 238 | 120.06 | wind | 1.0 | 10 | > th | dose independent | no | NA | NA |
| 287 | 120.96 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 13 |
| 303 | 121.02 | wind | 1.0 | 10 | < th | dose independent | sin | 10 | NA |
| 310 | 121.11 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 365 | 121.34 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 12 |
| 499 | 121.74 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 3 |
| 570 | 121.89 | wind | 1.0 | 10 | < th | dose independent | no | NA | NA |
| 617 | 121.96 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 17 |
| 664 | 122.14 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 724 | 122.20 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 19 |
| 754 | 122.29 | wind | 1.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 796 | 122.34 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 19 |
| 799 | 122.35 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 17 |
| 827 | 122.44 | wind | 1.0 | 10 | > th | dose independent | rect. | 16 | 15 |
| 842 | 122.50 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 851 | 122.55 | wind | 3.0 | 30 | < th | dose dependent | rect. | 1 | 7 |
| 878 | 122.67 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 902 | 122.78 | temperature | 30.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 914 | 122.88 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 918 | 122.88 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 925 | 122.90 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 929 | 122.92 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 930 | 122.93 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 13 |
| 931 | 122.93 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 945 | 122.99 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 950 | 123.01 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 959 | 123.05 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 14 | 22 |
| 964 | 123.08 | wind | 1.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 965 | 123.09 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 9 |
| 995 | 123.17 | wind | 3.0 | 30 | < th | dose dependent | sin | 9 | NA |
| 1000 | 123.19 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |