Os01g0937200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase aspartic, catalytic domain containing protein.
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Os01g0937200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase aspartic, catalytic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.3 | 0.309 | 9.7 | -0.143 | 0.923 | 0.267 | 0.265 | -0.278 | 0.0599 | 6.06 | 1006 | 631 | -- | -- |
| 43.66 | 0.308 | 9.7 | -0.141 | 0.917 | 0.259 | 0.254 | -- | 0.0706 | 6.07 | 1006 | 611 | -- | -- |
| 43.47 | 0.307 | 9.7 | -0.141 | 0.923 | 0.269 | -- | -0.27 | 0.0586 | 6.07 | 1006 | 621 | -- | -- |
| 43.81 | 0.308 | 9.7 | -0.138 | 0.918 | 0.262 | -- | -- | 0.0685 | 6.07 | 1006 | 611 | -- | -- |
| 82.01 | 0.422 | 9.7 | -0.0746 | -- | 0.382 | -- | -0.019 | 0.0741 | -- | 1006 | 212 | -- | -- |
| 48.24 | 0.326 | 9.68 | -0.145 | 0.945 | -- | 0.325 | -- | 0.178 | 6.13 | -- | -- | -- | -- |
| 48.5 | 0.326 | 9.68 | -0.142 | 0.947 | -- | -- | -- | 0.177 | 6.13 | -- | -- | -- | -- |
| 81.53 | 0.421 | 9.73 | -0.107 | -- | 0.405 | -- | -- | 0.0217 | -- | 1006 | 204 | -- | -- |
| 43.21 | 0.306 | 9.7 | -- | 0.873 | 0.271 | -- | -- | 0.0718 | 6.18 | 1006 | 129 | -- | -- |
| 94.96 | 0.455 | 9.69 | -0.115 | -- | -- | -- | -- | 0.198 | -- | -- | -- | -- | -- |
| 49.03 | 0.328 | 9.67 | -- | 0.945 | -- | -- | -- | 0.193 | 6.14 | -- | -- | -- | -- |
| 81.82 | 0.421 | 9.73 | -- | -- | 0.405 | -- | -- | 0.033 | -- | 1006 | 204 | -- | -- |
| 95.31 | 0.456 | 9.69 | -- | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.79 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 5 | 19 |
| 5 | 42.02 | wind | 3 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 9 | 42.31 | atmosphere | 1015 | 30 | < th | dose dependent | rect. | 6 | 23 |
| 10 | 42.35 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 43 | 43.08 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 4 | 20 |
| 44 | 43.11 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 7 | 17 |
| 46 | 43.12 | atmosphere | 1000 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 52 | 43.17 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 8 | 21 |
| 64 | 43.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 72 | 43.30 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 5 | 12 |
| 90 | 43.36 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 7 | 21 |
| 97 | 43.40 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 10 | 14 |
| 103 | 43.42 | atmosphere | 1005 | 30 | > th | dose independent | sin | 21 | NA |
| 142 | 43.54 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 7 | 12 |
| 145 | 43.55 | atmosphere | 1005 | 10 | < th | dose independent | sin | 21 | NA |
| 192 | 43.66 | wind | 3 | 30 | < th | dose independent | rect. | 6 | 23 |
| 193 | 43.67 | atmosphere | 1005 | 270 | > th | dose independent | sin | 22 | NA |
| 224 | 43.72 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 5 | 16 |
| 232 | 43.73 | wind | 1 | 30 | < th | dose dependent | sin | 17 | NA |
| 241 | 43.76 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 10 | 12 |
| 249 | 43.77 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 10 |
| 256 | 43.79 | wind | 1 | 30 | < th | dose dependent | rect. | 15 | 12 |
| 264 | 43.80 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 6 | 19 |
| 291 | 43.85 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 316 | 43.91 | wind | 1 | 30 | < th | dose dependent | rect. | 17 | 10 |
| 318 | 43.91 | wind | 1 | 30 | < th | dose dependent | rect. | 12 | 15 |
| 327 | 43.93 | wind | 1 | 30 | < th | dose dependent | rect. | 21 | 6 |
| 371 | 43.98 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 22 | 20 |
| 390 | 44.00 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 6 |
| 392 | 44.00 | wind | 1 | 270 | < th | dose dependent | rect. | 9 | 17 |
| 396 | 44.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 397 | 44.01 | temperature | 25 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 410 | 44.02 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 7 | 23 |
| 411 | 44.02 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 20 | 23 |
| 423 | 44.03 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 18 | 23 |
| 440 | 44.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 5 |
| 441 | 44.05 | temperature | 25 | 1440 | > th | dose independent | rect. | 18 | 8 |
| 446 | 44.05 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 9 | 23 |
| 462 | 44.08 | atmosphere | 1005 | 720 | > th | dose independent | no | NA | NA |
| 466 | 44.08 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 2 | 16 |
| 473 | 44.08 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 16 | 23 |
| 494 | 44.10 | atmosphere | 1005 | 270 | > th | dose dependent | sin | 21 | NA |
| 519 | 44.12 | atmosphere | 1005 | 720 | > th | dose independent | rect. | 14 | 23 |
| 527 | 44.13 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 2 | 22 |
| 542 | 44.14 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 10 | 12 |
| 569 | 44.16 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 11 | 10 |
| 604 | 44.18 | atmosphere | 1005 | 90 | > th | dose dependent | sin | 19 | NA |
| 605 | 44.18 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 9 | 6 |
| 644 | 44.21 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 14 | 22 |
| 649 | 44.21 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 5 | 12 |
| 650 | 44.21 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 4 | 15 |
| 670 | 44.22 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 7 | 9 |
| 691 | 44.23 | atmosphere | 1005 | 720 | > th | dose dependent | sin | 0 | NA |
| 713 | 44.24 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 4 | 13 |
| 718 | 44.25 | atmosphere | 1005 | 720 | < th | dose independent | no | NA | NA |
| 736 | 44.26 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 14 | 10 |
| 748 | 44.26 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 7 | 23 |
| 775 | 44.28 | wind | 1 | 270 | < th | dose independent | rect. | 8 | 18 |
| 811 | 44.29 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 9 | 23 |
| 812 | 44.29 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 11 | 23 |
| 869 | 44.32 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 878 | 44.33 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 22 | 21 |
| 915 | 44.35 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 18 | 23 |
| 935 | 44.36 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 939 | 44.36 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 17 |
| 980 | 44.38 | atmosphere | 1000 | 30 | > th | dose dependent | rect. | 18 | 23 |
| 985 | 44.39 | wind | 1 | 30 | < th | dose independent | rect. | 12 | 16 |
| 995 | 44.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 4 |