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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0934800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.9 (0.0571) R2 : 0.188
β1 : -1.16 (0.209) R2dD : 0.0575 R2D : 0.0534
β2 : 0.944 (0.148) R2dC : 0.0684 R2C : 0.061
β3 : 2.43 (0.566) R2dE : 0.044 R2E : -0.022
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 12.6 (2.49) R2dD*E : 0.0728 R2D*E : 0.0224
γ1 : -0.163 (0.122) R2dN8 : 0.0056 R2N8 : -0.00139
σ : 1.06
deviance : 520.74
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_____
C
peak time of C : 19.5
E
wheather : wind
threshold : 5.706
memory length : 129
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 23.5
open length of G : 10.4

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
506.95 1.06 3.9 -1.22 0.916 2.38 -2.3 11.3 -0.182 19.4 5.501 117 23.6 10.2
535.73 1.08 3.9 -1.24 0.939 1.8 -2.72 -- -0.172 19.3 5.599 72 23.7 11.1
520.74 1.06 3.9 -1.16 0.944 2.43 -- 12.6 -0.163 19.5 5.706 129 23.5 10.4
553.4 1.1 3.87 -1.21 0.913 1.44 -- -- -0.161 19.2 5.514 109 24 9.75
560.71 1.1 3.89 -1.21 -- 2.22 -- 14.8 -0.17 -- 5.703 152 23.6 10.3
542.87 1.09 3.89 -1.28 0.868 -- -2.54 -- -0.202 19.4 -- -- -- --
560.41 1.11 3.89 -1.23 0.865 -- -- -- -0.207 19.4 -- -- -- --
596.74 1.14 3.87 -1.23 -- 0.787 -- -- -0.19 -- 5.598 102 0.151 9.6
591.1 1.13 3.87 -- 0.892 1.21 -- -- -0.123 19.3 5.527 112 23.9 9.89
600.23 1.14 3.87 -1.24 -- -- -- -- -0.221 -- -- -- -- --
600 1.15 3.86 -- 0.877 -- -- -- -0.0701 19.3 -- -- -- --
606.42 1.15 3.79 -- -- 0.918 -- -- 0.0246 -- 7.393 45800 22.1 12.4
640.78 1.18 3.84 -- -- -- -- -- -0.0832 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 510.03 wind 5.0 90 > th dose dependent rect. 1 8
2 510.30 wind 5.0 90 > th dose dependent rect. 23 11
3 510.55 wind 5.0 90 > th dose dependent rect. 21 13
6 512.36 wind 5.0 90 > th dose independent rect. 24 10
10 515.24 atmosphere 1005.0 30 > th dose independent rect. 10 20
11 515.27 wind 5.0 90 > th dose independent rect. 21 13
14 516.24 atmosphere 1005.0 30 > th dose independent rect. 11 17
19 516.81 radiation 10.0 30 < th dose dependent rect. 6 2
26 517.50 wind 5.0 90 > th dose independent rect. 1 8
27 517.57 atmosphere 1005.0 30 > th dose independent rect. 11 13
29 517.58 atmosphere 1005.0 30 > th dose independent sin 16 NA
31 517.63 atmosphere 1000.0 270 < th dose dependent rect. 18 1
38 517.89 atmosphere 1000.0 270 < th dose independent rect. 18 1
44 518.36 atmosphere 1005.0 90 < th dose independent rect. 14 12
57 519.08 atmosphere 1005.0 90 < th dose independent rect. 14 9
60 519.14 atmosphere 1005.0 30 > th dose independent rect. 14 14
61 519.17 wind 5.0 90 > th dose dependent rect. 6 3
70 519.43 radiation 10.0 10 < th dose independent rect. 6 3
79 519.71 temperature 30.0 720 > th dose independent rect. 12 1
85 519.84 wind 7.0 90 > th dose independent rect. 8 1
91 519.95 atmosphere 1005.0 30 > th dose independent rect. 8 22
94 519.99 temperature 20.0 4320 > th dose independent rect. 13 1
99 520.14 atmosphere 1005.0 30 < th dose independent sin 16 NA
110 520.30 atmosphere 1000.0 10 > th dose dependent rect. 10 20
132 520.59 wind 7.0 90 > th dose independent rect. 4 5
165 521.09 atmosphere 1005.0 30 > th dose independent rect. 14 10
168 521.16 atmosphere 1000.0 90 > th dose dependent rect. 11 17
193 521.72 humidity 70.0 90 < th dose dependent rect. 19 1
213 521.88 radiation 10.0 10 < th dose dependent rect. 8 1
227 522.05 atmosphere 1005.0 10 < th dose independent rect. 14 16
250 522.29 atmosphere 1000.0 30 > th dose dependent rect. 8 22
255 522.39 radiation 1.0 90 < th dose independent rect. 6 11
258 522.43 temperature 30.0 270 < th dose independent rect. 23 19
269 522.52 atmosphere 1000.0 10 > th dose dependent sin 17 NA
270 522.52 temperature 20.0 4320 < th dose dependent rect. 12 7
291 522.69 temperature 20.0 1440 < th dose independent rect. 15 2
293 522.70 atmosphere 1005.0 10 < th dose independent rect. 12 12
298 522.73 atmosphere 1000.0 10 > th dose dependent rect. 11 13
299 522.73 atmosphere 1000.0 90 > th dose dependent rect. 11 13
306 522.75 temperature 25.0 10 < th dose dependent rect. 7 4
317 522.83 radiation 1.0 90 < th dose dependent rect. 6 10
327 522.90 atmosphere 1015.0 90 < th dose dependent rect. 13 10
339 522.96 humidity 70.0 90 < th dose independent rect. 19 1
364 523.09 temperature 30.0 720 > th dose dependent rect. 12 1
377 523.15 atmosphere 1000.0 270 > th dose dependent rect. 8 19
383 523.20 wind 1.0 10 > th dose dependent rect. 6 2
401 523.35 temperature 15.0 4320 > th dose independent rect. 4 1
403 523.37 atmosphere 1005.0 10 < th dose independent rect. 12 18
440 523.66 precipitation 0.1 90 > th dose independent rect. 7 1
446 523.66 precipitation 0.1 90 > th dose dependent rect. 7 1
462 523.73 radiation 1.0 270 < th dose independent rect. 14 1
463 523.73 temperature 20.0 4320 > th dose independent rect. 13 3
464 523.73 humidity 90.0 90 < th dose independent rect. 13 9
465 523.73 radiation 1.0 270 < th dose dependent rect. 14 1
495 523.94 atmosphere 1005.0 270 > th dose dependent sin 20 NA
514 524.09 temperature 15.0 14400 < th dose independent rect. 7 3
515 524.09 atmosphere 1005.0 30 > th dose independent rect. 11 9
531 524.21 temperature 30.0 720 > th dose independent rect. 8 7
563 524.23 wind 1.0 270 > th dose independent rect. 24 8
592 524.39 temperature 20.0 1440 > th dose independent rect. 15 1
599 524.45 temperature 20.0 90 > th dose independent rect. 13 9
648 524.76 temperature 10.0 90 > th dose dependent rect. 13 9
675 524.90 atmosphere 1005.0 10 > th dose dependent rect. 12 8
709 524.95 radiation 10.0 30 < th dose dependent rect. 6 6
754 525.11 temperature 15.0 4320 > th dose independent rect. 17 3
772 525.22 wind 5.0 90 > th dose independent sin 9 NA
785 525.27 atmosphere 1005.0 30 > th dose independent rect. 10 23
801 525.36 temperature 30.0 720 < th dose independent rect. 8 9
802 525.37 temperature 30.0 720 > th dose independent sin 4 NA
806 525.38 atmosphere 1015.0 10 < th dose dependent rect. 15 8
842 525.50 wind 3.0 90 > th dose dependent sin 9 NA
879 525.61 wind 3.0 14400 > th dose independent rect. 6 1
904 525.72 temperature 25.0 10 < th dose independent rect. 19 8
906 525.72 temperature 15.0 4320 > th dose independent rect. 11 10
908 525.72 temperature 15.0 10 > th dose dependent rect. 15 8
925 525.80 atmosphere 1005.0 30 > th dose independent rect. 8 16
932 525.84 temperature 15.0 4320 > th dose independent rect. 17 1
935 525.85 temperature 15.0 4320 > th dose independent rect. 9 12
954 525.92 atmosphere 1000.0 270 > th dose independent rect. 8 16
957 525.93 temperature 15.0 14400 > th dose independent rect. 7 3
964 525.95 wind 3.0 14400 < th dose independent rect. 6 1
989 526.01 temperature 15.0 4320 > th dose independent rect. 4 17