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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0934600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.93 (0.0361) R2 : 0.157
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 6.2 (0.684) R2dE : 0.152 R2E : 0.149
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.143 (0.0761) R2dN8 : 0.00843 R2N8 : 0.00494
σ : 0.679
deviance : 212.59
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C
peak time of C : --
E
wheather : humidity
threshold : 47.68
memory length : 2
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 6
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
207.93 0.678 2.85 0.403 0.0916 -9.55 -0.504 96.6 0.108 10.2 49 7 6.47 --
246.91 0.737 2.94 -0.247 0.129 0.551 -0.356 -- 0.102 9.29 49 7 6.47 --
208.52 0.673 2.84 0.527 0.108 -11.6 -- 117 0.0963 7.97 49.05 6 6.13 --
220.41 0.696 2.94 -0.399 0.0955 4.64 -- -- 0.108 7.35 48 9 8.17 --
209.27 0.674 2.84 0.548 -- -12 -- 121 0.106 -- 49.88 6 6.08 --
247.86 0.738 2.94 -0.238 0.122 -- -0.356 -- 0.0978 9.53 -- -- -- --
248.32 0.738 2.94 -0.251 0.123 -- -- -- 0.0977 10 -- -- -- --
209.46 0.674 2.94 -0.345 -- 6.33 -- -- 0.105 -- 47.6 2 6 --
211.92 0.678 2.93 -- 0.0958 6.12 -- -- 0.142 7.92 47.48 9 6.01 --
249.23 0.738 2.94 -0.253 -- -- -- -- 0.0976 -- -- -- -- --
249.98 0.74 2.93 -- 0.124 -- -- -- 0.126 10.2 -- -- -- --
212.59 0.679 2.93 -- -- 6.2 -- -- 0.143 -- 47.68 2 6 --
250.91 0.739 2.94 -- -- -- -- -- 0.126 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 207.92 humidity 50 90 < th dose dependent rect. 12 2
2 207.93 humidity 50 90 < th dose independent rect. 13 1
65 208.27 humidity 50 90 < th dose independent rect. 10 4
211 209.32 humidity 50 10 < th dose independent rect. 13 5
334 213.08 humidity 50 30 < th dose dependent sin 7 NA
380 216.06 humidity 50 10 < th dose independent sin 13 NA
381 216.56 humidity 50 10 < th dose dependent sin 12 NA
384 217.05 humidity 50 10 > th dose independent sin 13 NA
458 224.89 humidity 50 90 < th dose independent sin 7 NA
542 226.45 radiation 40 30 > th dose dependent sin 12 NA
546 227.26 radiation 40 90 > th dose independent rect. 12 2
571 227.70 radiation 40 30 > th dose dependent rect. 12 23
644 229.39 atmosphere 1005 10 < th dose independent rect. 13 1
682 229.70 humidity 60 1440 > th dose independent rect. 7 2
694 230.46 humidity 60 1440 > th dose independent rect. 1 8
701 230.77 humidity 60 270 < th dose dependent rect. 19 15
702 230.85 humidity 60 90 < th dose dependent rect. 17 17
704 230.88 humidity 60 90 < th dose independent rect. 17 17
709 230.89 humidity 60 270 < th dose dependent rect. 8 2
758 231.02 humidity 60 270 < th dose independent rect. 8 1
789 231.02 wind 1 10 < th dose dependent rect. 7 3
813 231.03 humidity 60 30 < th dose independent rect. 9 1
844 231.03 humidity 60 10 < th dose dependent rect. 9 1
971 231.11 radiation 40 30 > th dose independent sin 12 NA
977 231.11 wind 1 10 < th dose dependent rect. 7 6