Os01g0934500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0934500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.25 | 0.377 | 7.72 | -0.0573 | 0.634 | -1.68 | 0.575 | -1.81 | 0.474 | 4.34 | 24.88 | 35 | -- | -- |
| 68.76 | 0.389 | 7.76 | -0.304 | 0.678 | -1.48 | 0.0513 | -- | 0.396 | 4.42 | 25.89 | 22 | -- | -- |
| 64.89 | 0.375 | 7.72 | -0.0969 | 0.617 | -1.67 | -- | -1.56 | 0.484 | 4.46 | 24.42 | 43 | -- | -- |
| 68.65 | 0.388 | 7.76 | -0.307 | 0.635 | -1.49 | -- | -- | 0.41 | 4.48 | 25.3 | 34 | -- | -- |
| 81.95 | 0.424 | 7.71 | -0.0475 | -- | -1.55 | -- | -1.59 | 0.567 | -- | 23.39 | 45 | -- | -- |
| 102.05 | 0.474 | 7.68 | 0.0415 | 0.471 | -- | -0.0763 | -- | 0.713 | 6.41 | -- | -- | -- | -- |
| 102.06 | 0.473 | 7.68 | 0.0405 | 0.471 | -- | -- | -- | 0.714 | 6.41 | -- | -- | -- | -- |
| 85.8 | 0.433 | 7.74 | -0.237 | -- | -1.32 | -- | -- | 0.515 | -- | 24 | 41 | -- | -- |
| 70.92 | 0.394 | 7.74 | -- | 0.613 | -1.37 | -- | -- | 0.464 | 4.6 | 25.3 | 34 | -- | -- |
| 113.6 | 0.498 | 7.69 | 0.0527 | -- | -- | -- | -- | 0.724 | -- | -- | -- | -- | -- |
| 102.11 | 0.473 | 7.68 | -- | 0.472 | -- | -- | -- | 0.709 | 6.4 | -- | -- | -- | -- |
| 87.17 | 0.436 | 7.73 | -- | -- | -1.24 | -- | -- | 0.553 | -- | 23.98 | 18 | -- | -- |
| 113.67 | 0.498 | 7.69 | -- | -- | -- | -- | -- | 0.718 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.03 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 22 |
| 4 | 63.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 21 |
| 5 | 63.59 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 31 | 64.26 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 32 | 64.26 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 34 | 64.28 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 35 | 64.28 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 37 | 64.29 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 41 | 64.30 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 45 | 64.32 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 52 | 64.37 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 55 | 64.41 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 73 | 64.75 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 128 | 66.64 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 18 |
| 146 | 67.17 | temperature | 25 | 10 | < th | dose dependent | rect. | 14 | 16 |
| 260 | 68.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 314 | 69.49 | temperature | 25 | 270 | < th | dose dependent | sin | 13 | NA |
| 339 | 69.68 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 466 | 71.07 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 468 | 71.08 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 7 |
| 543 | 71.84 | temperature | 10 | 90 | > th | dose dependent | sin | 10 | NA |