Os01g0934200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mitochondrial substrate carrier family protein.
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Os01g0934200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mitochondrial substrate carrier family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.03 | 0.274 | 10.5 | -1.81 | 1.57 | 1.04 | -0.37 | 0.404 | -0.585 | 5.45 | 15.3 | 8 | -- | -- |
| 34.12 | 0.274 | 10.5 | -1.87 | 1.56 | 1.05 | -0.45 | -- | -0.6 | 5.44 | 15.4 | 7 | -- | -- |
| 34.32 | 0.275 | 10.5 | -1.79 | 1.57 | 1.05 | -- | 0.591 | -0.576 | 5.46 | 15.3 | 7 | -- | -- |
| 34.62 | 0.276 | 10.5 | -1.87 | 1.56 | 1.05 | -- | -- | -0.599 | 5.46 | 15.68 | 7 | -- | -- |
| 136.37 | 0.544 | 10.5 | -1.5 | -- | -0.694 | -- | -0.143 | -0.329 | -- | 8.614 | 391 | -- | -- |
| 45.63 | 0.317 | 10.5 | -1.66 | 1.37 | -- | -0.473 | -- | -0.448 | 6.06 | -- | -- | -- | -- |
| 46.16 | 0.318 | 10.5 | -1.66 | 1.37 | -- | -- | -- | -0.446 | 6.1 | -- | -- | -- | -- |
| 124.02 | 0.519 | 10.5 | -1.49 | -- | -0.829 | -- | -- | -0.358 | -- | 25 | 401 | -- | -- |
| 117.77 | 0.508 | 10.4 | -- | 1.42 | 0.266 | -- | -- | -0.283 | 5.95 | 24.5 | 7 | -- | -- |
| 143.78 | 0.56 | 10.5 | -1.62 | -- | -- | -- | -- | -0.415 | -- | -- | -- | -- | -- |
| 118.87 | 0.51 | 10.4 | -- | 1.35 | -- | -- | -- | -0.261 | 6.17 | -- | -- | -- | -- |
| 181.03 | 0.627 | 10.4 | -- | -- | -1.04 | -- | -- | -0.168 | -- | 24.69 | 412 | -- | -- |
| 213.18 | 0.681 | 10.4 | -- | -- | -- | -- | -- | -0.235 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 2 | 32.35 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 20 |
| 7 | 33.06 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 21 |
| 8 | 33.07 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 14 |
| 10 | 33.12 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 13 | 33.28 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 43 | 33.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 53 | 33.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 68 | 34.07 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 78 | 34.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 85 | 34.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 19 |
| 97 | 34.29 | temperature | 30 | 10 | < th | dose dependent | sin | 21 | NA |
| 105 | 34.31 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 111 | 34.34 | temperature | 10 | 10 | > th | dose dependent | sin | 22 | NA |
| 114 | 34.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 118 | 34.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 179 | 34.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 199 | 34.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 201 | 34.86 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 211 | 34.89 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 222 | 34.96 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 18 |
| 242 | 35.06 | temperature | 20 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 282 | 35.24 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 11 |
| 298 | 35.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 13 |
| 334 | 35.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 347 | 35.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 10 |
| 362 | 35.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 391 | 35.58 | temperature | 30 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 436 | 35.71 | wind | 1 | 720 | > th | dose independent | rect. | 4 | 13 |
| 520 | 35.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 19 |
| 536 | 36.00 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 22 |
| 594 | 36.11 | temperature | 10 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 595 | 36.12 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 20 |
| 639 | 36.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 661 | 36.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 700 | 36.33 | temperature | 25 | 30 | > th | dose independent | rect. | 9 | 14 |
| 706 | 36.34 | temperature | 30 | 720 | < th | dose dependent | sin | 3 | NA |
| 725 | 36.39 | temperature | 30 | 90 | < th | dose independent | rect. | 5 | 12 |
| 731 | 36.40 | temperature | 25 | 90 | < th | dose independent | sin | 21 | NA |
| 732 | 36.40 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 14 |
| 830 | 36.55 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 13 |
| 861 | 36.59 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 893 | 36.64 | humidity | 70 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 939 | 36.71 | temperature | 25 | 270 | < th | dose independent | rect. | 4 | 17 |
| 996 | 36.77 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |