Os01g0933900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glutathione transferase III(B) (EC 2.5.1.18).
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Os01g0933900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glutathione transferase III(B) (EC 2.5.1.18).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.59 | 0.487 | 11.2 | 0.554 | 0.892 | 0.697 | 0.478 | -2.07 | 0.541 | 4.6 | 90.97 | 220 | -- | -- |
| 111.24 | 0.491 | 11.2 | 0.484 | 0.91 | 0.833 | -0.418 | -- | 0.536 | 4.21 | 92 | 409 | -- | -- |
| 107.23 | 0.482 | 11.2 | 0.521 | 0.939 | 0.803 | -- | -2.35 | 0.515 | 4.59 | 92.9 | 206 | -- | -- |
| 111.67 | 0.492 | 11.2 | 0.497 | 0.915 | 0.821 | -- | -- | 0.537 | 4.19 | 92 | 413 | -- | -- |
| 133.95 | 0.539 | 11.2 | 0.53 | -- | 1.25 | -- | -1.53 | 0.677 | -- | 88.7 | 209 | -- | -- |
| 119.7 | 0.513 | 11.2 | 0.554 | 1.13 | -- | -0.133 | -- | 0.42 | 4.64 | -- | -- | -- | -- |
| 119.75 | 0.512 | 11.2 | 0.555 | 1.13 | -- | -- | -- | 0.421 | 4.64 | -- | -- | -- | -- |
| 136.38 | 0.544 | 11.2 | 0.426 | -- | 1.22 | -- | -- | 0.628 | -- | 88.47 | 248 | -- | -- |
| 118.08 | 0.506 | 11.2 | -- | 0.892 | 0.892 | -- | -- | 0.491 | 4.14 | 91.8 | 403 | -- | -- |
| 187.1 | 0.639 | 11.2 | 0.598 | -- | -- | -- | -- | 0.45 | -- | -- | -- | -- | -- |
| 127.87 | 0.529 | 11.2 | -- | 1.14 | -- | -- | -- | 0.359 | 4.63 | -- | -- | -- | -- |
| 141.15 | 0.553 | 11.2 | -- | -- | 1.26 | -- | -- | 0.587 | -- | 88.41 | 257 | -- | -- |
| 196.53 | 0.654 | 11.2 | -- | -- | -- | -- | -- | 0.384 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.24 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 104.24 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 105.32 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 4 | 105.34 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 5 | 105.97 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 6 | 105.97 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 14 | 1 |
| 7 | 106.02 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 23 | 1 |
| 10 | 106.15 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 12 | 106.19 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 18 |
| 13 | 106.20 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 20 | 106.38 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 23 | 106.43 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 24 | 106.43 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 25 | 106.46 | wind | 7.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 30 | 106.63 | wind | 7.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 31 | 106.71 | wind | 5.0 | 270 | < th | dose independent | rect. | 21 | 13 |
| 45 | 106.96 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 12 | 11 |
| 51 | 107.15 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 22 | 3 |
| 59 | 107.25 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 60 | 107.28 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 22 |
| 64 | 107.33 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 21 |
| 73 | 107.40 | wind | 7.0 | 720 | < th | dose independent | rect. | 15 | 10 |
| 110 | 108.08 | wind | 5.0 | 720 | < th | dose independent | rect. | 6 | 20 |
| 111 | 108.09 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 8 | 22 |
| 118 | 108.14 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 119 | 108.15 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 123 | 108.17 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 125 | 108.21 | humidity | 90.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 140 | 108.32 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 186 | 108.49 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 215 | 108.56 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 4 |
| 231 | 108.60 | humidity | 90.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 254 | 108.72 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 20 | 10 |
| 259 | 108.75 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 12 |
| 267 | 108.78 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 23 | 13 |
| 270 | 108.79 | wind | 5.0 | 720 | > th | dose dependent | rect. | 15 | 21 |
| 274 | 108.80 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 23 | 16 |
| 327 | 109.02 | wind | 5.0 | 720 | > th | dose independent | rect. | 20 | 20 |
| 350 | 109.09 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 357 | 109.10 | wind | 9.0 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 367 | 109.13 | wind | 5.0 | 720 | > th | dose independent | rect. | 17 | 23 |
| 398 | 109.20 | wind | 5.0 | 720 | > th | dose independent | rect. | 8 | 20 |
| 417 | 109.25 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 429 | 109.28 | wind | 5.0 | 720 | > th | dose independent | rect. | 8 | 18 |
| 469 | 109.33 | wind | 5.0 | 720 | > th | dose independent | rect. | 14 | 23 |
| 493 | 109.41 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 494 | 109.41 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 23 | 10 |
| 496 | 109.42 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 14 |
| 497 | 109.42 | wind | 5.0 | 720 | > th | dose independent | rect. | 3 | 23 |
| 548 | 109.53 | wind | 5.0 | 720 | > th | dose independent | no | NA | NA |
| 562 | 109.55 | wind | 5.0 | 720 | > th | dose independent | rect. | 1 | 23 |
| 565 | 109.56 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 583 | 109.59 | wind | 5.0 | 720 | < th | dose independent | no | NA | NA |
| 611 | 109.67 | wind | 5.0 | 720 | > th | dose independent | rect. | 11 | 23 |
| 613 | 109.68 | humidity | 90.0 | 90 | > th | dose independent | sin | 7 | NA |
| 615 | 109.68 | wind | 3.0 | 720 | > th | dose dependent | rect. | 3 | 20 |
| 634 | 109.72 | wind | 5.0 | 90 | < th | dose independent | rect. | 23 | 12 |
| 638 | 109.73 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 646 | 109.75 | wind | 3.0 | 720 | > th | dose dependent | rect. | 1 | 22 |
| 647 | 109.76 | wind | 5.0 | 720 | < th | dose independent | rect. | 5 | 13 |
| 657 | 109.77 | wind | 3.0 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 666 | 109.78 | wind | 3.0 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 693 | 109.81 | wind | 3.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 700 | 109.83 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 714 | 109.84 | wind | 3.0 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 772 | 109.92 | humidity | 90.0 | 90 | > th | dose independent | rect. | 23 | 12 |
| 774 | 109.92 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 796 | 109.95 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 824 | 110.01 | humidity | 90.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 826 | 110.01 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 838 | 110.02 | wind | 3.0 | 720 | > th | dose dependent | no | NA | NA |
| 854 | 110.05 | wind | 5.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 917 | 110.10 | wind | 5.0 | 720 | < th | dose independent | rect. | 6 | 11 |
| 931 | 110.11 | wind | 3.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 938 | 110.12 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 12 |
| 939 | 110.12 | wind | 7.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 967 | 110.15 | wind | 5.0 | 90 | < th | dose independent | rect. | 21 | 23 |
| 980 | 110.17 | wind | 5.0 | 30 | < th | dose independent | rect. | 23 | 21 |