Os01g0933300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0933300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 192.74 | 0.652 | 2.98 | 0.176 | 0.0218 | -2.25 | 0.259 | -4.79 | 0.0045 | 22.9 | 8.93 | 79 | -- | -- |
| 195.35 | 0.651 | 2.96 | 0.158 | 0.00974 | -1.15 | 0.125 | -- | 0.0157 | 22.8 | 8.948 | 91 | -- | -- |
| 192.68 | 0.647 | 2.98 | 0.184 | 0.021 | -2.23 | -- | -4.81 | 0.0102 | 18.8 | 8.988 | 63 | -- | -- |
| 195.33 | 0.651 | 2.96 | 0.151 | 0.0334 | -1.1 | -- | -- | 0.0171 | 18.9 | 8.9 | 91 | -- | -- |
| 192.74 | 0.647 | 2.98 | 0.187 | -- | -2.3 | -- | -4.97 | 0.00529 | -- | 8.982 | 63 | -- | -- |
| 199.11 | 0.662 | 2.97 | 0.0792 | 0.0736 | -- | -0.248 | -- | -0.0175 | 15.8 | -- | -- | -- | -- |
| 199.27 | 0.661 | 2.97 | 0.0755 | 0.0762 | -- | -- | -- | -0.0189 | 16.8 | -- | -- | -- | -- |
| 195.4 | 0.651 | 2.96 | 0.148 | -- | -1.13 | -- | -- | 0.00875 | -- | 8.906 | 91 | -- | -- |
| 195.88 | 0.652 | 2.96 | -- | 0.0382 | -1.06 | -- | -- | -0.00266 | 18.2 | 9 | 91 | -- | -- |
| 199.58 | 0.66 | 2.97 | 0.0726 | -- | -- | -- | -- | -0.0208 | -- | -- | -- | -- | -- |
| 199.42 | 0.661 | 2.97 | -- | 0.0748 | -- | -- | -- | -0.0273 | 16.8 | -- | -- | -- | -- |
| 195.96 | 0.652 | 2.96 | -- | -- | -1.06 | -- | -- | -0.00917 | -- | 8.971 | 91 | -- | -- |
| 199.72 | 0.66 | 2.97 | -- | -- | -- | -- | -- | -0.0289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.95 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 5 | 188.96 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 17 | 190.06 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 19 | 190.15 | humidity | 60.0 | 30 | < th | dose independent | rect. | 18 | 16 |
| 21 | 190.19 | humidity | 60.0 | 30 | < th | dose dependent | rect. | 18 | 16 |
| 22 | 190.20 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 24 | 190.26 | humidity | 60.0 | 10 | < th | dose independent | rect. | 16 | 18 |
| 25 | 190.28 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 27 | 190.33 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 28 | 190.45 | humidity | 60.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 29 | 190.47 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 44 | 190.53 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 3 |
| 45 | 190.54 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 47 | 190.57 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 67 | 190.69 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 14 | 21 |
| 68 | 190.70 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 6 |
| 74 | 190.74 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 16 |
| 77 | 190.75 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 78 | 190.75 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 80 | 190.78 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 3 |
| 84 | 190.81 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 85 | 190.81 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 87 | 190.82 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 17 |
| 96 | 190.90 | humidity | 60.0 | 30 | < th | dose independent | sin | 11 | NA |
| 107 | 190.98 | humidity | 60.0 | 30 | > th | dose independent | sin | 11 | NA |
| 110 | 190.99 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 137 | 190.99 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 174 | 191.08 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 193 | 191.10 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 15 | 18 |
| 201 | 191.13 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 202 | 191.14 | temperature | 30.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 210 | 191.18 | humidity | 60.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 272 | 191.19 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 384 | 191.27 | wind | 9.0 | 30 | < th | dose independent | sin | 16 | NA |
| 441 | 191.41 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 10 |
| 449 | 191.44 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 8 |
| 462 | 191.48 | humidity | 60.0 | 10 | < th | dose independent | rect. | 14 | 21 |
| 524 | 191.63 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 2 |
| 568 | 191.66 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 18 |
| 580 | 191.70 | radiation | 40.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 674 | 191.91 | wind | 1.0 | 10 | < th | dose dependent | sin | 21 | NA |
| 689 | 191.97 | radiation | 40.0 | 90 | < th | dose independent | sin | 12 | NA |
| 704 | 192.00 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 705 | 192.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 721 | 192.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 767 | 192.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 768 | 192.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 820 | 192.20 | wind | 1.0 | 10 | < th | dose dependent | rect. | 1 | 6 |
| 836 | 192.30 | wind | 7.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 889 | 192.34 | wind | 3.0 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 901 | 192.34 | wind | 9.0 | 90 | > th | dose dependent | rect. | 14 | 21 |
| 903 | 192.35 | wind | 7.0 | 10 | > th | dose dependent | sin | 17 | NA |
| 942 | 192.40 | wind | 7.0 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 950 | 192.45 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 953 | 192.46 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 956 | 192.47 | radiation | 40.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 991 | 192.51 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 5 | 2 |
| 993 | 192.52 | wind | 9.0 | 90 | > th | dose independent | rect. | 14 | 21 |
| 999 | 192.53 | wind | 5.0 | 10 | > th | dose independent | rect. | 15 | 1 |