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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0932700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.74 (0.0286) R2 : 0.0159
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.163 (0.0602) R2dN8 : 0.0205 R2N8 : 0.0159
σ : 0.538
deviance : 133.06
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
127.59 0.531 2.74 -0.0181 0.0232 0.86 -0.264 -1.05 0.187 0.0847 0.4685 27 -- --
127.81 0.527 2.73 -0.00596 0.00807 0.766 -0.327 -- 0.185 1.22 0.4001 26 -- --
127.73 0.526 2.74 -0.0264 0.0696 0.939 -- -1.53 0.189 19.8 0.4574 26 -- --
128.11 0.527 2.73 0.00732 0.0548 0.769 -- -- 0.189 19.6 0.4468 26 -- --
127.92 0.527 2.74 -0.00967 -- 0.875 -- -1.26 0.188 -- 0.4322 26 -- --
132.53 0.54 2.74 0.032 0.0631 -- -0.243 -- 0.165 1.52 -- -- -- --
132.77 0.54 2.74 0.0401 0.0633 -- -- -- 0.167 1.62 -- -- -- --
128.27 0.527 2.73 0.0078 -- 0.746 -- -- 0.188 -- 0.4656 26 -- --
128.11 0.527 2.73 -- 0.0549 0.771 -- -- 0.189 19.6 0.4453 26 -- --
133.01 0.539 2.74 0.0426 -- -- -- -- 0.168 -- -- -- -- --
132.81 0.539 2.74 -- 0.0641 -- -- -- 0.162 1.64 -- -- -- --
128.27 0.527 2.73 -- -- 0.748 -- -- 0.187 -- 0.4744 26 -- --
133.06 0.538 2.74 -- -- -- -- -- 0.163 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 114.55 wind 1 10 < th dose dependent rect. 7 1
6 115.65 wind 1 10 < th dose independent rect. 7 1
40 120.95 radiation 30 10 > th dose dependent rect. 7 2
145 124.50 temperature 25 90 < th dose dependent rect. 12 1
150 124.80 temperature 25 10 < th dose independent rect. 13 1
178 125.63 temperature 30 270 > th dose dependent rect. 8 1
192 125.65 temperature 25 90 < th dose independent rect. 12 6
202 126.05 temperature 30 270 > th dose independent rect. 8 1
218 126.06 radiation 10 90 > th dose dependent rect. 6 1
223 126.06 temperature 30 30 < th dose dependent rect. 13 6
233 126.07 temperature 30 10 < th dose dependent rect. 13 1
258 126.19 radiation 30 10 > th dose independent rect. 8 1
267 126.30 atmosphere 1005 30 > th dose dependent rect. 13 6
289 126.49 temperature 25 720 < th dose dependent rect. 11 3
297 126.63 wind 1 30 < th dose dependent sin 23 NA
303 126.68 temperature 25 720 < th dose dependent rect. 16 1
307 126.77 atmosphere 1005 30 > th dose dependent rect. 13 1
315 126.85 temperature 30 90 > th dose dependent rect. 10 1
326 126.91 temperature 25 720 < th dose dependent rect. 11 7
392 127.57 wind 5 90 > th dose independent rect. 13 1
405 127.64 humidity 80 30 < th dose independent rect. 1 1
409 127.64 humidity 80 30 < th dose dependent rect. 1 1
418 127.66 wind 9 10 > th dose independent rect. 18 1
422 127.66 wind 9 10 > th dose dependent rect. 18 1
430 127.68 radiation 1 30 > th dose dependent rect. 18 1
437 127.68 wind 9 30 > th dose dependent rect. 18 8
459 127.70 wind 5 90 > th dose dependent rect. 13 1
463 127.70 wind 9 10 > th dose dependent rect. 18 4
508 127.75 humidity 90 1440 < th dose independent rect. 4 3
565 127.93 wind 5 90 > th dose independent rect. 2 1
566 127.93 wind 5 90 > th dose dependent rect. 2 1
571 127.93 wind 1 30 < th dose dependent rect. 6 23
572 127.94 atmosphere 1005 30 > th dose dependent rect. 17 2
576 127.96 humidity 90 1440 > th dose independent rect. 4 3
683 128.20 humidity 90 1440 > th dose dependent rect. 4 3
686 128.21 wind 1 4320 < th dose dependent rect. 7 1
694 128.24 wind 1 30 < th dose dependent rect. 1 7
700 128.27 humidity 80 10 < th dose dependent rect. 18 1
705 128.28 humidity 90 1440 > th dose dependent rect. 4 1
709 128.28 atmosphere 1005 90 > th dose dependent rect. 12 9
724 128.31 temperature 25 720 < th dose independent rect. 16 1
745 128.35 temperature 25 10 > th dose dependent rect. 7 1
779 128.39 temperature 30 10 < th dose dependent rect. 18 1
824 128.44 humidity 50 1440 > th dose dependent rect. 4 4
868 128.52 wind 1 270 < th dose dependent rect. 4 21
869 128.53 temperature 25 90 < th dose independent rect. 16 1
882 128.55 temperature 25 720 > th dose independent rect. 11 6
890 128.56 radiation 30 10 < th dose independent rect. 14 1
896 128.57 temperature 30 90 > th dose independent rect. 10 1
909 128.59 temperature 30 10 < th dose dependent rect. 13 16
925 128.62 wind 1 30 > th dose independent rect. 4 13
951 128.67 humidity 60 30 > th dose independent rect. 13 1
954 128.67 temperature 25 90 < th dose independent rect. 12 10
967 128.69 temperature 30 30 < th dose dependent rect. 13 10
974 128.71 temperature 25 720 > th dose independent rect. 12 1
982 128.72 humidity 90 1440 > th dose independent rect. 23 9
990 128.73 temperature 25 720 > th dose independent rect. 12 3
994 128.73 humidity 70 10 > th dose dependent rect. 18 1
996 128.73 humidity 70 1440 > th dose dependent rect. 23 10
998 128.74 atmosphere 1005 30 > th dose independent rect. 13 1